BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014198
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   134   6e-29
emb|CBI32027.3| unnamed protein product [Vitis vinifera]              125   2e-26
ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi...   119   1e-24
ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein lig...   117   4e-24
ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein lig...   115   3e-23

>ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  134 bits (336), Expect = 6e-29
 Identities = 76/132 (57%), Positives = 84/132 (63%), Gaps = 4/132 (3%)
 Frame = -1

Query: 1075 HALLLT----VFMLGGNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVCGLD 908
            H L+LT    VFMLGGN HG+L  PQK       S       G E+  R   LEKV GLD
Sbjct: 261  HMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEES-REENLEKVQGLD 319

Query: 907  GIKAVNIAAGAEHSALITENGKIMTWGWGEHGQLGLGNEEDRIAPQIVSLDVKLLKVQTR 728
            G+  V IAAGAEHSAL+TEN  I TWGWGEHGQLGLGN  D+I+PQ V L  +L    T 
Sbjct: 320  GLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTM 379

Query: 727  FTVYCGSGFTFA 692
              VYCGSGFTFA
Sbjct: 380  IKVYCGSGFTFA 391


>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  125 bits (314), Expect = 2e-26
 Identities = 71/133 (53%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
 Frame = -1

Query: 1075 HALLLT----VFMLGGNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVCGLD 908
            H L+LT    VFMLGGN HG+L  PQK           +  +   ++ R   LEKV GLD
Sbjct: 274  HMLVLTGGGEVFMLGGNRHGVLGDPQK----------GSQVKHLSEESREENLEKVQGLD 323

Query: 907  GIKAVNIAAGAEHSALITENGKIM-TWGWGEHGQLGLGNEEDRIAPQIVSLDVKLLKVQT 731
            G+  V IAAGAEHSAL+T N  ++ TWGWGEHGQLGLGN  D+I+PQ V L  +L    T
Sbjct: 324  GLNVVQIAAGAEHSALVTGNILVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHT 383

Query: 730  RFTVYCGSGFTFA 692
               VYCGSGFTFA
Sbjct: 384  MIKVYCGSGFTFA 396


>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
            gi|355514908|gb|AES96531.1| RCC1 and BTB
            domain-containing protein [Medicago truncatula]
          Length = 615

 Score =  119 bits (299), Expect = 1e-24
 Identities = 69/132 (52%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
 Frame = -1

Query: 1075 HALLLT----VFMLGGNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVCGLD 908
            HAL +T    V+MLGGNH G+LS     R              S  D R + LEK  GLD
Sbjct: 492  HALAMTGEGKVYMLGGNHLGVLSDLHNARPAK-----------SLFDSREANLEKAPGLD 540

Query: 907  GIKAVNIAAGAEHSALITENGKIMTWGWGEHGQLGLGNEEDRIAPQIVSLDVKLLKVQTR 728
            G K  +IA GAEHS L+TENG+I TWGWGEHGQLGLG++ DRI+P  V+L   L +  + 
Sbjct: 541  GTKITDIATGAEHSVLVTENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDLNEAAS- 599

Query: 727  FTVYCGSGFTFA 692
              VYCGSGFTFA
Sbjct: 600  IRVYCGSGFTFA 611


>ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 388

 Score =  117 bits (294), Expect = 4e-24
 Identities = 67/132 (50%), Positives = 83/132 (62%), Gaps = 4/132 (3%)
 Frame = -1

Query: 1075 HALLLT----VFMLGGNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVCGLD 908
            HAL ++    V+MLGGNH G+LS  Q +           G      D R   LEKV GLD
Sbjct: 265  HALAMSGEGEVYMLGGNHLGVLSDLQNI-----------GPAKHFPDLREFNLEKVPGLD 313

Query: 907  GIKAVNIAAGAEHSALITENGKIMTWGWGEHGQLGLGNEEDRIAPQIVSLDVKLLKVQTR 728
            G K  +IAAGAEHS ++TE+G+I TWGWGEHGQLGLG+  D+ +P  VSLD  L +  + 
Sbjct: 314  GTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAAS- 372

Query: 727  FTVYCGSGFTFA 692
              V+CGSGFTFA
Sbjct: 373  IRVFCGSGFTFA 384


>ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
            sativus]
          Length = 608

 Score =  115 bits (287), Expect = 3e-23
 Identities = 64/132 (48%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
 Frame = -1

Query: 1075 HALLLT----VFMLGGNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVCGLD 908
            HAL+LT    ++MLGG HHG LS  + L     +S +S      ED+      + V  L 
Sbjct: 479  HALVLTDEGELYMLGGKHHGALSDSEML-----NSMKSLPGDSREDN-----FQAVPALS 528

Query: 907  GIKAVNIAAGAEHSALITENGKIMTWGWGEHGQLGLGNEEDRIAPQIVSLDVKLLKVQTR 728
            GIK ++IAAGAEHS ++TE+G + TWGWGEHGQLGLG+  D   PQ V+L++KL      
Sbjct: 529  GIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYD 588

Query: 727  FTVYCGSGFTFA 692
              VYCGSGFT A
Sbjct: 589  VKVYCGSGFTVA 600