BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014192
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi...   235   2e-60
ref|XP_002512769.1| pentatricopeptide repeat-containing protein,...   234   4e-60
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-52
ref|XP_003623854.1| Pentatricopeptide repeat-containing protein ...   206   1e-51
gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]   206   1e-51

>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
           protein product [Vitis vinifera]
          Length = 687

 Score =  235 bits (600), Expect = 2e-60
 Identities = 107/151 (70%), Positives = 132/151 (87%)
 Frame = +2

Query: 2   KNHHIQPDADHYSSMVDVLSRAGRVEEAYDFIKKMPIEPTAGAWGALLGACRVYKNVDLG 181
           ++H ++PDADH+S MVDVLSRAGR+EEAY+FIKKMPIEPTAGAWGALLG CRVYKNV+LG
Sbjct: 444 RDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELG 503

Query: 182 QIAAMKLFDIEPDNPGNYALLSNIFVAAKQWDNASHIRKLMRDRGITKLPGISWVQVKNK 361
           +IAA +LF+IE DNPGNY LLSNI V+AK W  AS  RKLMRDRG+TK PG SW+QV+N+
Sbjct: 504 RIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNR 563

Query: 362 TYSFSAGDKRNEQSDKIYKFLEELGDKMRLA 454
            ++F  GDK N+QSD+IY+FL+ +G+KMR+A
Sbjct: 564 VHTFVVGDKSNDQSDEIYRFLDYMGEKMRIA 594


>ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547780|gb|EEF49272.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score =  234 bits (598), Expect = 4e-60
 Identities = 111/148 (75%), Positives = 125/148 (84%)
 Frame = +2

Query: 8   HHIQPDADHYSSMVDVLSRAGRVEEAYDFIKKMPIEPTAGAWGALLGACRVYKNVDLGQI 187
           H I PDADHYS MVDVLSRAGR+EEAYDFI+KMPIEPTA AWGALLGACRVYKNV+LG +
Sbjct: 443 HSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTL 502

Query: 188 AAMKLFDIEPDNPGNYALLSNIFVAAKQWDNASHIRKLMRDRGITKLPGISWVQVKNKTY 367
           AA +LF+IEPDN GNY LLSNI V AK+W  AS IRK+MRD+G+ K PG SWVQVKNK Y
Sbjct: 503 AASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVY 562

Query: 368 SFSAGDKRNEQSDKIYKFLEELGDKMRL 451
           SF  GDK NEQ D IY+FL+E+ +KMRL
Sbjct: 563 SFVTGDKSNEQKDMIYRFLDEIDEKMRL 590


>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  209 bits (533), Expect = 1e-52
 Identities = 96/151 (63%), Positives = 123/151 (81%)
 Frame = +2

Query: 2   KNHHIQPDADHYSSMVDVLSRAGRVEEAYDFIKKMPIEPTAGAWGALLGACRVYKNVDLG 181
           ++H ++PDA+HY+ MVDV SRAGR+ EAY+FI++MP+EPTA AWGALLGACRVYKNV+L 
Sbjct: 498 RDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELA 557

Query: 182 QIAAMKLFDIEPDNPGNYALLSNIFVAAKQWDNASHIRKLMRDRGITKLPGISWVQVKNK 361
           +I+A KLF+IEP+NPGNY  L NI V AK W  AS  R LM++RGITK PG SW+QV ++
Sbjct: 558 KISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDR 617

Query: 362 TYSFSAGDKRNEQSDKIYKFLEELGDKMRLA 454
            ++F  GDK N +SDKIY FL+ELG+KM+ A
Sbjct: 618 VHTFVVGDKNNMESDKIYNFLDELGEKMKSA 648


>ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498869|gb|AES80072.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  206 bits (525), Expect = 1e-51
 Identities = 95/151 (62%), Positives = 121/151 (80%)
 Frame = +2

Query: 2   KNHHIQPDADHYSSMVDVLSRAGRVEEAYDFIKKMPIEPTAGAWGALLGACRVYKNVDLG 181
           ++H ++PDA+HYS +VD+ SRAGR+ EAY FI+ MP+EPTA AWGALL ACRVYKNV+L 
Sbjct: 530 RDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELA 589

Query: 182 QIAAMKLFDIEPDNPGNYALLSNIFVAAKQWDNASHIRKLMRDRGITKLPGISWVQVKNK 361
           +I+A KLF+IEP+NPGNY  L NI V AK W  AS +R LM++RGITK PG SW+QV NK
Sbjct: 590 KISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNK 649

Query: 362 TYSFSAGDKRNEQSDKIYKFLEELGDKMRLA 454
            ++F  GDK N +SDKIY FL+EL +KM++A
Sbjct: 650 VHTFVVGDKSNIESDKIYNFLDELVEKMKMA 680


>gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  206 bits (525), Expect = 1e-51
 Identities = 95/151 (62%), Positives = 121/151 (80%)
 Frame = +2

Query: 2   KNHHIQPDADHYSSMVDVLSRAGRVEEAYDFIKKMPIEPTAGAWGALLGACRVYKNVDLG 181
           ++H ++PDA+HYS +VD+ SRAGR+ EAY FI+ MP+EPTA AWGALL ACRVYKNV+L 
Sbjct: 444 RDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELA 503

Query: 182 QIAAMKLFDIEPDNPGNYALLSNIFVAAKQWDNASHIRKLMRDRGITKLPGISWVQVKNK 361
           +I+A KLF+IEP+NPGNY  L NI V AK W  AS +R LM++RGITK PG SW+QV NK
Sbjct: 504 KISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNK 563

Query: 362 TYSFSAGDKRNEQSDKIYKFLEELGDKMRLA 454
            ++F  GDK N +SDKIY FL+EL +KM++A
Sbjct: 564 VHTFVVGDKSNIESDKIYNFLDELVEKMKMA 594