BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014191
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [...    64   5e-08
gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japo...    64   5e-08
ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like...    61   3e-07
emb|CBI33172.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...    60   4e-07

>dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
           Japonica Group] gi|42409258|dbj|BAD10521.1| putative
           splicing factor 3b, subunit 3, 130kDa [Oryza sativa
           Japonica Group] gi|125538000|gb|EAY84395.1| hypothetical
           protein OsI_05771 [Oryza sativa Indica Group]
          Length = 1234

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
 Frame = -3

Query: 295 LEHDNEPFSELKFKYFDAIPLRY-VCS-ENWYLFAASEFGD----QFRGIEIDVDVESSS 134
           LEH N+  +EL+ KYFD IP+   +C   + +LFAASEFG+    QFR I  DVDVESSS
Sbjct: 327 LEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLFAASEFGNHALYQFRDIGRDVDVESSS 386

Query: 133 STFMEID 113
           +T ME D
Sbjct: 387 ATLMETD 393


>gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
          Length = 1224

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
 Frame = -3

Query: 295 LEHDNEPFSELKFKYFDAIPLRY-VCS-ENWYLFAASEFGD----QFRGIEIDVDVESSS 134
           LEH N+  +EL+ KYFD IP+   +C   + +LFAASEFG+    QFR I  DVDVESSS
Sbjct: 317 LEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLFAASEFGNHALYQFRDIGRDVDVESSS 376

Query: 133 STFMEID 113
           +T ME D
Sbjct: 377 ATLMETD 383


>ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
           distachyon]
          Length = 1228

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
 Frame = -3

Query: 295 LEHDNEPFSELKFKYFDAIPL-RYVC-SENWYLFAASEFGD----QFRGIEIDVDVESSS 134
           LEH+ +  SEL+ KYFD IP+   +C   + +LFAASEFG+    QFR I  DVDVESSS
Sbjct: 322 LEHNGDSVSELRIKYFDTIPVASAICVLRSGFLFAASEFGNHALYQFRDIGRDVDVESSS 381

Query: 133 STFMEID 113
           +T ME +
Sbjct: 382 ATLMETE 388


>emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
 Frame = -3

Query: 295 LEHDNEPFSELKFKYFDAIPL--RYVCSENWYLFAASEFGD----QFRGIEIDVDVESSS 134
           LEH+N+  SELK KYFD IP+       ++ +LFAASEFG+    QF+ I  D DVESSS
Sbjct: 172 LEHENDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFQAIGDDADVESSS 231

Query: 133 STFMEID 113
           ++ ME +
Sbjct: 232 ASLMETE 238


>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
 Frame = -3

Query: 295 LEHDNEPFSELKFKYFDAIPL--RYVCSENWYLFAASEFGD----QFRGIEIDVDVESSS 134
           LEH+N+  SELK KYFD IP+       ++ +LFAASEFG+    QF+ I  D DVESSS
Sbjct: 311 LEHENDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFQAIGDDADVESSS 370

Query: 133 STFMEID 113
           ++ ME +
Sbjct: 371 ASLMETE 377