BLASTX nr result

ID: Coptis21_contig00014184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014184
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24276.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit...   105   5e-21
emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]   105   5e-21
ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   104   6e-21
ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...   104   6e-21

>emb|CBI24276.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +3

Query: 27  YLLSCYDAELCYDCFTDTFQARYPSHYSRAPVIEQCVHWDRIRAPPVDIPPHDVHASDCL 206
           ++LSCYDAEL YD  TDTFQARYP H  R   IE  V WDR+RAPPV+ PPHD+H SDCL
Sbjct: 208 FMLSCYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCL 267

Query: 207 DKLHPG 224
           ++LHPG
Sbjct: 268 NELHPG 273


>ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 396

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +3

Query: 27  YLLSCYDAELCYDCFTDTFQARYPSHYSRAPVIEQCVHWDRIRAPPVDIPPHDVHASDCL 206
           ++LSCYDAEL YD  TDTFQARYP H  R   IE  V WDR+RAPPV+ PPHD+H SDCL
Sbjct: 229 FMLSCYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCL 288

Query: 207 DKLHPG 224
           ++LHPG
Sbjct: 289 NELHPG 294


>emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]
          Length = 364

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +3

Query: 27  YLLSCYDAELCYDCFTDTFQARYPSHYSRAPVIEQCVHWDRIRAPPVDIPPHDVHASDCL 206
           ++LSCYDAEL YD  TDTFQARYP H  R   IE  V WDR+RAPPV+ PPHD+H SDCL
Sbjct: 164 FMLSCYDAELSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAPPVETPPHDLHMSDCL 223

Query: 207 DKLHPG 224
           ++LHPG
Sbjct: 224 NELHPG 229


>ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like
           [Cucumis sativus]
          Length = 369

 Score =  104 bits (260), Expect = 6e-21
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = +3

Query: 27  YLLSCYDAELCYDCFTDTFQARYPSHYSRAPVIEQCVHWDRIRAPPVDIPPHDVHASDCL 206
           ++LSCYDAELCYD  TDTFQARYP H  RA  IE  V W+R+R+PP+D PPHD+H SDCL
Sbjct: 229 FMLSCYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCL 288

Query: 207 DKLHPG 224
           ++L PG
Sbjct: 289 NELWPG 294


>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score =  104 bits (260), Expect = 6e-21
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = +3

Query: 27  YLLSCYDAELCYDCFTDTFQARYPSHYSRAPVIEQCVHWDRIRAPPVDIPPHDVHASDCL 206
           ++LSCYDAELCYD  TDTFQARYP H  RA  IE  V W+R+R+PP+D PPHD+H SDCL
Sbjct: 201 FMLSCYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCL 260

Query: 207 DKLHPG 224
           ++L PG
Sbjct: 261 NELWPG 266


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