BLASTX nr result

ID: Coptis21_contig00014176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014176
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246...   156   5e-36
ref|XP_002523099.1| conserved hypothetical protein [Ricinus comm...   155   7e-36
ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II tra...   154   3e-35
emb|CBI36875.3| unnamed protein product [Vitis vinifera]              154   3e-35
ref|XP_002321001.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34

>ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246950 [Vitis vinifera]
          Length = 139

 Score =  156 bits (394), Expect = 5e-36
 Identities = 78/116 (67%), Positives = 91/116 (78%)
 Frame = -1

Query: 687 DMTECVXXXXXXXXXXXXXXXLQAIDRSPHPTHQIDVERHAREFMEAAKKLQLYFIGLQQ 508
           DM  CV               LQAIDRSPHP+HQIDVERHAR+FMEAAKKLQ+YFI LQ+
Sbjct: 24  DMIACVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQVYFISLQR 83

Query: 507 EENPSEAETLRKEISAMEEELKTKSELIKRHEKLIQGWRTELKEQLDKHVTELERV 340
           E+ P++AETLRKEI+ MEEEL+ K+ELI + E+LIQGWR ELK+QLDKH TELERV
Sbjct: 84  EDQPTKAETLRKEIAVMEEELRLKTELINKQERLIQGWRKELKDQLDKHNTELERV 139


>ref|XP_002523099.1| conserved hypothetical protein [Ricinus communis]
           gi|223537661|gb|EEF39284.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  155 bits (393), Expect = 7e-36
 Identities = 79/116 (68%), Positives = 89/116 (76%)
 Frame = -1

Query: 687 DMTECVXXXXXXXXXXXXXXXLQAIDRSPHPTHQIDVERHAREFMEAAKKLQLYFIGLQQ 508
           DM ECV               LQAIDRSPHP+HQIDVERHAR+FMEAAKKLQLYFIGLQ+
Sbjct: 25  DMIECVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQR 84

Query: 507 EENPSEAETLRKEISAMEEELKTKSELIKRHEKLIQGWRTELKEQLDKHVTELERV 340
           E+ P+ AETLRKEI+ MEEELK K E+IK+ E+LIQ WR EL +QL KH TELERV
Sbjct: 85  EDQPTAAETLRKEIAVMEEELKIKDEIIKKQERLIQEWRKELTDQLQKHKTELERV 140


>ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           28-like [Cucumis sativus]
           gi|449484322|ref|XP_004156851.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 28-like [Cucumis
           sativus]
          Length = 141

 Score =  154 bits (388), Expect = 3e-35
 Identities = 71/94 (75%), Positives = 87/94 (92%)
 Frame = -1

Query: 621 QAIDRSPHPTHQIDVERHAREFMEAAKKLQLYFIGLQQEENPSEAETLRKEISAMEEELK 442
           QAIDRSPHP+HQ+DVERHAR+FMEAAKKLQLYFIGLQ+E+ P++ ETLRKEISA+EEELK
Sbjct: 48  QAIDRSPHPSHQVDVERHARDFMEAAKKLQLYFIGLQREDQPTKVETLRKEISAIEEELK 107

Query: 441 TKSELIKRHEKLIQGWRTELKEQLDKHVTELERV 340
            K+E+IK+ EKLI+GW+ +LK+QLDKH  ELE+V
Sbjct: 108 VKNEIIKKQEKLIEGWKKDLKDQLDKHNNELEKV 141


>emb|CBI36875.3| unnamed protein product [Vitis vinifera]
          Length = 110

 Score =  154 bits (388), Expect = 3e-35
 Identities = 73/94 (77%), Positives = 86/94 (91%)
 Frame = -1

Query: 621 QAIDRSPHPTHQIDVERHAREFMEAAKKLQLYFIGLQQEENPSEAETLRKEISAMEEELK 442
           QAIDRSPHP+HQIDVERHAR+FMEAAKKLQ+YFI LQ+E+ P++AETLRKEI+ MEEEL+
Sbjct: 17  QAIDRSPHPSHQIDVERHARDFMEAAKKLQVYFISLQREDQPTKAETLRKEIAVMEEELR 76

Query: 441 TKSELIKRHEKLIQGWRTELKEQLDKHVTELERV 340
            K+ELI + E+LIQGWR ELK+QLDKH TELERV
Sbjct: 77  LKTELINKQERLIQGWRKELKDQLDKHNTELERV 110


>ref|XP_002321001.1| predicted protein [Populus trichocarpa] gi|222861774|gb|EEE99316.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  150 bits (380), Expect = 2e-34
 Identities = 73/94 (77%), Positives = 83/94 (88%)
 Frame = -1

Query: 621 QAIDRSPHPTHQIDVERHAREFMEAAKKLQLYFIGLQQEENPSEAETLRKEISAMEEELK 442
           QAIDRSPHP+HQIDVERHAR+FMEAAKKLQLYFIGLQ+E+ P+ +ETLRK+I  MEEELK
Sbjct: 22  QAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQREDQPTMSETLRKDIGMMEEELK 81

Query: 441 TKSELIKRHEKLIQGWRTELKEQLDKHVTELERV 340
            K ELIKR E+LIQGW  ELK+Q +KH TELERV
Sbjct: 82  VKDELIKRQERLIQGWWKELKDQAEKHNTELERV 115


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