BLASTX nr result

ID: Coptis21_contig00014158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014158
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530821.1| PREDICTED: uncharacterized protein LOC100797...   112   4e-23
ref|XP_002308738.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002304175.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_003547303.1| PREDICTED: enhancer of mRNA-decapping protei...   110   9e-23
ref|XP_003534751.1| PREDICTED: enhancer of mRNA-decapping protei...   110   9e-23

>ref|XP_003530821.1| PREDICTED: uncharacterized protein LOC100797699 [Glycine max]
          Length = 680

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/89 (62%), Positives = 65/89 (73%)
 Frame = -3

Query: 311 NPTATRMDYIAEFTVAVPILILTGTSDCLPDGEHVVQVYCVQTQAIQQYALELSQCLPPT 132
           NP +TRMDYIAEFTV +PIL  TGTSD LP GEH+VQVYCVQTQAIQQYAL+L+QCLPP 
Sbjct: 375 NPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPP 434

Query: 131 PETTAWRNQTGVYSELNPPSSDGFGSADT 45
            E     N     S  +P + +GF S D+
Sbjct: 435 YENVGLENSDSSVSR-DPITVEGFHSLDS 462


>ref|XP_002308738.1| predicted protein [Populus trichocarpa] gi|222854714|gb|EEE92261.1|
           predicted protein [Populus trichocarpa]
          Length = 1440

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/103 (59%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 PTATRMDYIAEFTVAVPILILTGTSDCLPDGEHVVQVYCVQTQAIQQYALELSQCLPPTP 129
           P ATRMDYIAEFTV +PIL LTGTSD LP+GEH+VQVYCVQTQAIQQYAL LSQCLPP  
Sbjct: 565 PAATRMDYIAEFTVTMPILSLTGTSDSLPNGEHIVQVYCVQTQAIQQYALNLSQCLPPPL 624

Query: 128 ETTAW-RNQTGVYSELNPPSSDGFGSADTVTVSDAPEMPTPVS 3
           E     R ++ V    +  +SDG     T+  S     PT +S
Sbjct: 625 ENMELERTESNVSHAFDASNSDG----STIMESSHGSKPTYMS 663


>ref|XP_002304175.1| predicted protein [Populus trichocarpa] gi|222841607|gb|EEE79154.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/103 (59%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 PTATRMDYIAEFTVAVPILILTGTSDCLPDGEHVVQVYCVQTQAIQQYALELSQCLPPTP 129
           P ATRMDYIAEFTV +PIL LTGTSD LP+GEH+VQVYCVQTQAIQQYAL LSQCLPP  
Sbjct: 63  PAATRMDYIAEFTVTMPILSLTGTSDSLPNGEHIVQVYCVQTQAIQQYALNLSQCLPPPL 122

Query: 128 ETTAW-RNQTGVYSELNPPSSDGFGSADTVTVSDAPEMPTPVS 3
           E     R ++ V    +  +SDG     T+  S     PT +S
Sbjct: 123 ENMELERTESNVSHAFDASNSDG----STIMESSHRSKPTYMS 161


>ref|XP_003547303.1| PREDICTED: enhancer of mRNA-decapping protein 4-like [Glycine max]
          Length = 1405

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = -3

Query: 311 NPTATRMDYIAEFTVAVPILILTGTSDCLPDGEHVVQVYCVQTQAIQQYALELSQCLPP 135
           NPTATRMDYIAEFTV +PIL LTGTSD LPDGEH+VQ+YCVQTQAIQQY L LSQCLPP
Sbjct: 560 NPTATRMDYIAEFTVTMPILSLTGTSDSLPDGEHIVQIYCVQTQAIQQYGLNLSQCLPP 618


>ref|XP_003534751.1| PREDICTED: enhancer of mRNA-decapping protein 4-like [Glycine max]
          Length = 1407

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = -3

Query: 311 NPTATRMDYIAEFTVAVPILILTGTSDCLPDGEHVVQVYCVQTQAIQQYALELSQCLPP 135
           NPTATRMDYIAEFTV +PIL LTGTSD LPDGEH+VQ+YCVQTQAIQQY L LSQCLPP
Sbjct: 560 NPTATRMDYIAEFTVTMPILSLTGTSDSLPDGEHIVQIYCVQTQAIQQYGLNLSQCLPP 618


Top