BLASTX nr result

ID: Coptis21_contig00014148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014148
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283374.1| PREDICTED: uncharacterized protein LOC100266...    60   4e-15
emb|CAN66196.1| hypothetical protein VITISV_008705 [Vitis vinifera]    60   4e-15
gb|EEE51126.1| hypothetical protein OsJ_31869 [Oryza sativa Japo...    47   2e-07
ref|NP_001176203.1| Os10g0474600 [Oryza sativa Japonica Group] g...    47   2e-07
gb|ABK26423.1| unknown [Picea sitchensis]                              44   8e-07

>ref|XP_002283374.1| PREDICTED: uncharacterized protein LOC100266687 [Vitis vinifera]
           gi|297741935|emb|CBI33370.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score = 60.5 bits (145), Expect(2) = 4e-15
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -3

Query: 264 DCDMEGVDSEEVGCSDAWEGMGATTNLGGLEWH 166
           DC+MEGVD +EVGC+ AWEG+G+TT LGGLEWH
Sbjct: 197 DCNMEGVDGDEVGCNQAWEGVGSTT-LGGLEWH 228



 Score = 45.4 bits (106), Expect(2) = 4e-15
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = -1

Query: 389 KHLLILGXXXXXXXXXXXDATFVLDEKQKPLYNHYASGSGWWTATWKGL 243
           KHL++LG           +  F+ ++K +PL+NHYA+GSGWW    +G+
Sbjct: 156 KHLVVLGGDPKPKQTGRLE-NFIRNKKPRPLFNHYANGSGWWDCNMEGV 203


>emb|CAN66196.1| hypothetical protein VITISV_008705 [Vitis vinifera]
          Length = 151

 Score = 60.5 bits (145), Expect(2) = 4e-15
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -3

Query: 264 DCDMEGVDSEEVGCSDAWEGMGATTNLGGLEWH 166
           DC+MEGVD +EVGC+ AWEG+G+TT LGGLEWH
Sbjct: 120 DCNMEGVDGDEVGCNQAWEGVGSTT-LGGLEWH 151



 Score = 45.4 bits (106), Expect(2) = 4e-15
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = -1

Query: 389 KHLLILGXXXXXXXXXXXDATFVLDEKQKPLYNHYASGSGWWTATWKGL 243
           KHL++LG           +  F+ ++K +PL+NHYA+GSGWW    +G+
Sbjct: 79  KHLVVLGGDPKPKQTGRLE-NFIRNKKPRPLFNHYANGSGWWDCNMEGV 126


>gb|EEE51126.1| hypothetical protein OsJ_31869 [Oryza sativa Japonica Group]
          Length = 1835

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = -3

Query: 258  DMEGVDSEEVG-CSDAWEGMGATTNLGGLEWH 166
            +MEGVD EEVG   D WEGMG+ T LGGLEWH
Sbjct: 1805 EMEGVDGEEVGWTDDMWEGMGSIT-LGGLEWH 1835



 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 296  YNHYASGSGWWTATWKGL 243
            YNHYASG GWW    +G+
Sbjct: 1792 YNHYASGGGWWHGEMEGV 1809


>ref|NP_001176203.1| Os10g0474600 [Oryza sativa Japonica Group]
           gi|255679485|dbj|BAH94931.1| Os10g0474600 [Oryza sativa
           Japonica Group]
          Length = 288

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = -3

Query: 258 DMEGVDSEEVG-CSDAWEGMGATTNLGGLEWH 166
           +MEGVD EEVG   D WEGMG+ T LGGLEWH
Sbjct: 258 EMEGVDGEEVGWTDDMWEGMGSIT-LGGLEWH 288



 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 296 YNHYASGSGWWTATWKGL 243
           YNHYASG GWW    +G+
Sbjct: 245 YNHYASGGGWWHGEMEGV 262


>gb|ABK26423.1| unknown [Picea sitchensis]
          Length = 232

 Score = 43.9 bits (102), Expect(2) = 8e-07
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -3

Query: 264 DCDMEGVDSEEVGCSDAWEGMGATTNLGGL 175
           D DM GVDS+EVG ++ WEGMG+TT +GGL
Sbjct: 204 DTDMVGVDSDEVGSTEIWEGMGSTT-IGGL 232



 Score = 33.9 bits (76), Expect(2) = 8e-07
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 320 LDEKQKPLYNHYASGSGWWTATWKGL 243
           +DE  + ++NHYA G GWW     G+
Sbjct: 185 MDEIPRTIFNHYADGGGWWDTDMVGV 210


Top