BLASTX nr result

ID: Coptis21_contig00014145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014145
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [...    64   2e-08
emb|CAN69112.1| hypothetical protein VITISV_031839 [Vitis vinifera]    64   2e-08
emb|CBI17313.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...    63   3e-08
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]    63   3e-08

>ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [Vitis vinifera]
           gi|302141699|emb|CBI18902.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = -3

Query: 244 YTFFFAAKHADF-TVHPG-ETNVSKVVSEAWCKLSEDEKRVYQKMQAKDFERYQREKKEY 71
           Y FFF+ KHA F +++P  E   +K++ E+W  LS +EK VYQK+  KD ERY++E KEY
Sbjct: 240 YNFFFSEKHALFKSLYPDREREFTKMIGESWSSLSLEEKEVYQKLGIKDKERYKKEMKEY 299

Query: 70  RDEINLLKMK 41
           ++ +  ++ +
Sbjct: 300 KERMGAVQQR 309


>emb|CAN69112.1| hypothetical protein VITISV_031839 [Vitis vinifera]
          Length = 324

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = -3

Query: 244 YTFFFAAKHADF-TVHPG-ETNVSKVVSEAWCKLSEDEKRVYQKMQAKDFERYQREKKEY 71
           Y FFF+ KHA F +++P  E   +K++ E+W  LS +EK VYQK+  KD ERY++E KEY
Sbjct: 240 YNFFFSEKHALFKSLYPDREREFTKMIGESWSSLSLEEKEVYQKLGIKDKERYKKEMKEY 299

Query: 70  RDEINLLKMK 41
           ++ +  ++ +
Sbjct: 300 KERMGAVQQR 309


>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 244 YTFFFAAKHADFT-VHPG-ETNVSKVVSEAWCKLSEDEKRVYQKMQAKDFERYQREKKEY 71
           Y FFFA +HA    +HPG +  +S+++ E W KL E+EK VYQ+   KD ERY+ E ++Y
Sbjct: 298 YNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDY 357

Query: 70  RDEINL 53
           R+ + +
Sbjct: 358 RERLKM 363


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 244 YTFFFAAKHADFT-VHPG-ETNVSKVVSEAWCKLSEDEKRVYQKMQAKDFERYQREKKEY 71
           Y FFFA +HA    +HPG +  +S+++ E W KL E+EK VYQ+   KD ERY+ E ++Y
Sbjct: 297 YNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDY 356

Query: 70  RDEINL 53
           R+ + +
Sbjct: 357 RERLKM 362


>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
          Length = 461

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 244 YTFFFAAKHADFT-VHPG-ETNVSKVVSEAWCKLSEDEKRVYQKMQAKDFERYQREKKEY 71
           Y FFFA +HA    +HPG +  +S+++ E W KL E+EK VYQ+   KD ERY+ E ++Y
Sbjct: 276 YNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDY 335

Query: 70  RDEINL 53
           R+ + +
Sbjct: 336 RERLKM 341


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