BLASTX nr result
ID: Coptis21_contig00014134
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014134
(358 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group] g... 120 1e-25
ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea ma... 114 6e-24
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi... 106 2e-21
gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thal... 105 5e-21
ref|NP_172798.2| pentatricopeptide repeat-containing protein [Ar... 105 5e-21
>ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|49388051|dbj|BAD25165.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|49388408|dbj|BAD25541.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|113535522|dbj|BAF07905.1|
Os02g0164600 [Oryza sativa Japonica Group]
gi|125538213|gb|EAY84608.1| hypothetical protein
OsI_05976 [Oryza sativa Indica Group]
gi|125580926|gb|EAZ21857.1| hypothetical protein
OsJ_05503 [Oryza sativa Japonica Group]
gi|215737275|dbj|BAG96204.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 476
Score = 120 bits (301), Expect = 1e-25
Identities = 64/119 (53%), Positives = 85/119 (71%)
Frame = +2
Query: 2 TMMEVMSACANLGYLDHARGFHAFLEKMGWTEAEVSIRNSLIDAYSKCGSISCASRIFHE 181
T++ V SACA LG L++A+G HA++EK+G E E+ ++NSLID Y KCGSI A +F
Sbjct: 225 TVVSVASACAGLGSLEYAKGLHAYVEKVG-LEGELIVKNSLIDMYGKCGSIELARGLFGL 283
Query: 182 TRCLQRDTYSWTAMIAGLAMNGRGIEAVKWFYQMKLVAGVVPDAVTFIAVLFACAHAWL 358
Q+D +SWTAMI+GLA +G G EAV F+ MK AGV+PD+ TF+ VL AC+HA L
Sbjct: 284 MP--QKDLHSWTAMISGLASHGHGKEAVALFFSMK-EAGVLPDSTTFVVVLSACSHAGL 339
>ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
gi|194693506|gb|ACF80837.1| unknown [Zea mays]
gi|413926460|gb|AFW66392.1| hypothetical protein
ZEAMMB73_680096 [Zea mays]
Length = 473
Score = 114 bits (286), Expect = 6e-24
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 TMMEVMSACANLGYLDHARGFHAFLEKMGWTEAEVSIRNSLIDAYSKCGSISCASRIFHE 181
T++ + +ACA LG L+HA+G H+++EK G E E+ +RN+L+D Y KCG I A R+F
Sbjct: 222 TVVSLATACAGLGSLEHAKGLHSYVEKAG-LEDELIVRNALVDMYGKCGCIESAHRLF-- 278
Query: 182 TRCLQR--DTYSWTAMIAGLAMNGRGIEAVKWFYQMKLVAGVVPDAVTFIAVLFACAHAW 355
CL R D +SWT MI+GL+ +GRG EAV F+ M GV+PD+ TFI VL AC+HA
Sbjct: 279 --CLMREKDLHSWTTMISGLSSHGRGEEAVGLFFSM-CEEGVLPDSTTFIVVLSACSHAG 335
Query: 356 L 358
L
Sbjct: 336 L 336
Score = 55.1 bits (131), Expect = 6e-06
Identities = 36/120 (30%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Frame = +2
Query: 2 TMMEVMSACANLGYLD----HARGFHAFLEKMGWTEAEVSIRNSLIDAYSKCGSISCASR 169
T+ ++SAC+ G+ H +GF ++G+ V + +L++AY KCGS++ A R
Sbjct: 120 TLPLLISACSCSGFTLCQSLHGQGF-----RLGYN-CHVFTQTALLNAYLKCGSVATACR 173
Query: 170 IFHETRCLQRDTYSWTAMIAGLAMNGRGIEAVKWFYQMKLVAGVV-PDAVTFIAVLFACA 346
+F E +D +WT+M++G + ++AV+ F +M+ +V P+ T +++ ACA
Sbjct: 174 VFEEMPV--KDVVAWTSMVSGYVDSRMYLKAVEVFNEMRGADDLVWPNEATVVSLATACA 231
>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 106 bits (264), Expect = 2e-21
Identities = 53/115 (46%), Positives = 79/115 (68%)
Frame = +2
Query: 14 VMSACANLGYLDHARGFHAFLEKMGWTEAEVSIRNSLIDAYSKCGSISCASRIFHETRCL 193
V+SACA G + R H F+EK G+ + +S+ N+LID YSKCG++ A +F L
Sbjct: 275 VLSACAQAGAFEFGRILHGFVEKSGFLQI-ISVNNALIDTYSKCGNLDMARLVFDNM--L 331
Query: 194 QRDTYSWTAMIAGLAMNGRGIEAVKWFYQMKLVAGVVPDAVTFIAVLFACAHAWL 358
+R SWTAMIAG+AM+G G EA++ F +M+ + + PD++TFI++L+AC+HA L
Sbjct: 332 RRSAVSWTAMIAGMAMHGYGEEAIRLFNEME-ESNIKPDSITFISILYACSHAGL 385
>gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 105 bits (261), Expect = 5e-21
Identities = 53/119 (44%), Positives = 75/119 (63%)
Frame = +2
Query: 2 TMMEVMSACANLGYLDHARGFHAFLEKMGWTEAEVSIRNSLIDAYSKCGSISCASRIFHE 181
TM V+SACA LG D + H + E +G+ + +V+++N+LID Y KCG+I A +F
Sbjct: 137 TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 196
Query: 182 TRCLQRDTYSWTAMIAGLAMNGRGIEAVKWFYQMKLVAGVVPDAVTFIAVLFACAHAWL 358
+ +RD SW MI GLA +G G EA+ F++MK +G+ PD VTF+ VL AC H L
Sbjct: 197 IK--RRDLISWNTMINGLAAHGHGTEALNLFHEMK-NSGISPDKVTFVGVLCACKHMGL 252
>ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein
[Arabidopsis thaliana] gi|332190892|gb|AEE29013.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 474
Score = 105 bits (261), Expect = 5e-21
Identities = 53/119 (44%), Positives = 75/119 (63%)
Frame = +2
Query: 2 TMMEVMSACANLGYLDHARGFHAFLEKMGWTEAEVSIRNSLIDAYSKCGSISCASRIFHE 181
TM V+SACA LG D + H + E +G+ + +V+++N+LID Y KCG+I A +F
Sbjct: 190 TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 182 TRCLQRDTYSWTAMIAGLAMNGRGIEAVKWFYQMKLVAGVVPDAVTFIAVLFACAHAWL 358
+ +RD SW MI GLA +G G EA+ F++MK +G+ PD VTF+ VL AC H L
Sbjct: 250 IK--RRDLISWNTMINGLAAHGHGTEALNLFHEMK-NSGISPDKVTFVGVLCACKHMGL 305