BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014128
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase...   520   e-145
emb|CBI25238.3| unnamed protein product [Vitis vinifera]              518   e-144
gb|AFK47013.1| unknown [Lotus japonicus]                              506   e-141
ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase ...   502   e-140

>ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
            chloroplastic-like [Vitis vinifera]
          Length = 442

 Score =  520 bits (1340), Expect = e-145
 Identities = 249/287 (86%), Positives = 273/287 (95%)
 Frame = -1

Query: 1125 VVCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRA 946
            VVCHIVKNYI HLLN  VPLILGIWGGKGQGKSFQTELIFQAMG+EPVIMSAGELES+RA
Sbjct: 156  VVCHIVKNYIAHLLNTNVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERA 215

Query: 945  GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSD 766
            GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAG+GRFGNTQ+TVNNQI VGTLMNLSD
Sbjct: 216  GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGIGRFGNTQVTVNNQIAVGTLMNLSD 275

Query: 765  NTTRVSVGQDWRDSDISHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCK 586
            N TRVS+GQDWR++DI++R+PIIVTGND STIYAPLIRDGRMDKFYWQPTHEDI NIV +
Sbjct: 276  NPTRVSIGQDWRETDITNRVPIIVTGNDFSTIYAPLIRDGRMDKFYWQPTHEDIINIVDR 335

Query: 585  MYEKDGISREAVVNVVDSFPNQALDFYGALRSRTYDRSVSKWVDDIGGIKNLGTTLLKRR 406
            MYEKDGISR+AVV +VD+FPNQALDFYGALRSRTYDRS+SKWVDDIGG++NLG  LL+RR
Sbjct: 336  MYEKDGISRDAVVRIVDTFPNQALDFYGALRSRTYDRSISKWVDDIGGVENLGNKLLRRR 395

Query: 405  KDDQLTTFVPPKQTVEALLESGYSLLKEQQLIMENKLSKEYMKNMDD 265
            KD++L  FVPPKQT++ALLESGYSL+KEQQLIME KLSKEYMKN+DD
Sbjct: 396  KDEKLPVFVPPKQTIDALLESGYSLIKEQQLIMETKLSKEYMKNIDD 442


>emb|CBI25238.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  518 bits (1333), Expect = e-144
 Identities = 247/286 (86%), Positives = 272/286 (95%)
 Frame = -1

Query: 1122 VCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRAG 943
            +CHIVKNYI HLLN  VPLILGIWGGKGQGKSFQTELIFQAMG+EPVIMSAGELES+RAG
Sbjct: 155  MCHIVKNYIAHLLNTNVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 214

Query: 942  EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDN 763
            EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAG+GRFGNTQ+TVNNQI VGTLMNLSDN
Sbjct: 215  EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGIGRFGNTQVTVNNQIAVGTLMNLSDN 274

Query: 762  TTRVSVGQDWRDSDISHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCKM 583
             TRVS+GQDWR++DI++R+PIIVTGND STIYAPLIRDGRMDKFYWQPTHEDI NIV +M
Sbjct: 275  PTRVSIGQDWRETDITNRVPIIVTGNDFSTIYAPLIRDGRMDKFYWQPTHEDIINIVDRM 334

Query: 582  YEKDGISREAVVNVVDSFPNQALDFYGALRSRTYDRSVSKWVDDIGGIKNLGTTLLKRRK 403
            YEKDGISR+AVV +VD+FPNQALDFYGALRSRTYDRS+SKWVDDIGG++NLG  LL+RRK
Sbjct: 335  YEKDGISRDAVVRIVDTFPNQALDFYGALRSRTYDRSISKWVDDIGGVENLGNKLLRRRK 394

Query: 402  DDQLTTFVPPKQTVEALLESGYSLLKEQQLIMENKLSKEYMKNMDD 265
            D++L  FVPPKQT++ALLESGYSL+KEQQLIME KLSKEYMKN+DD
Sbjct: 395  DEKLPVFVPPKQTIDALLESGYSLIKEQQLIMETKLSKEYMKNIDD 440


>gb|AFK47013.1| unknown [Lotus japonicus]
          Length = 421

 Score =  506 bits (1304), Expect = e-141
 Identities = 243/287 (84%), Positives = 268/287 (93%)
 Frame = -1

Query: 1125 VVCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRA 946
            VVCHI KNY+ HLLNVKVPLILGIWGGKGQGK+FQTELIF AMG+EPVIMSAGELES+RA
Sbjct: 135  VVCHIAKNYLAHLLNVKVPLILGIWGGKGQGKTFQTELIFHAMGMEPVIMSAGELESERA 194

Query: 945  GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSD 766
            GEPG+LIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSD
Sbjct: 195  GEPGRLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSD 254

Query: 765  NTTRVSVGQDWRDSDISHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCK 586
            N TRVSVGQDWR+SDI++RIPIIVTGND STIYAPLIRDGRMDKFYWQP  EDI NIV +
Sbjct: 255  NPTRVSVGQDWRESDITNRIPIIVTGNDFSTIYAPLIRDGRMDKFYWQPNREDIQNIVHR 314

Query: 585  MYEKDGISREAVVNVVDSFPNQALDFYGALRSRTYDRSVSKWVDDIGGIKNLGTTLLKRR 406
            MYEKDGISR+ V  +VD+FPNQALDFYGALRSRTYD+S+ KWVDDIGG++N GT +LKRR
Sbjct: 315  MYEKDGISRDEVERIVDTFPNQALDFYGALRSRTYDKSILKWVDDIGGVENFGTKILKRR 374

Query: 405  KDDQLTTFVPPKQTVEALLESGYSLLKEQQLIMENKLSKEYMKNMDD 265
            KD  L  F+PP+QTV+ALLESGYSL+KEQ+L+ME+KLSKEYMKNM+D
Sbjct: 375  KDQNLPVFIPPEQTVDALLESGYSLIKEQELVMESKLSKEYMKNMED 421


>ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|222846423|gb|EEE83970.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  504 bits (1298), Expect = e-140
 Identities = 242/287 (84%), Positives = 270/287 (94%)
 Frame = -1

Query: 1125 VVCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRA 946
            VVCHIVKNY+ H LNVKVPLILGIWGGKGQGKSFQTELIFQ +GVEPVIMSAGELES+RA
Sbjct: 142  VVCHIVKNYLAHRLNVKVPLILGIWGGKGQGKSFQTELIFQTLGVEPVIMSAGELESERA 201

Query: 945  GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSD 766
            GEPG+LIRERYRTASQVVQNQGKMSCLMIND+DAGLGRFGNTQMTVNNQIVVGTLMNLSD
Sbjct: 202  GEPGRLIRERYRTASQVVQNQGKMSCLMINDLDAGLGRFGNTQMTVNNQIVVGTLMNLSD 261

Query: 765  NTTRVSVGQDWRDSDISHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCK 586
            N TRVS+GQDWR+SDI++R+PIIVTGND STIYAPLIRDGRM+KFYWQP  EDI NIV +
Sbjct: 262  NPTRVSIGQDWRESDITNRVPIIVTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHR 321

Query: 585  MYEKDGISREAVVNVVDSFPNQALDFYGALRSRTYDRSVSKWVDDIGGIKNLGTTLLKRR 406
            MYEKDGISR+ VV++V+ FPNQALDFYGALRSRTYDRS+SKWVDDIGGI+NLG  LL+R+
Sbjct: 322  MYEKDGISRDEVVSIVNKFPNQALDFYGALRSRTYDRSISKWVDDIGGIENLGKQLLRRK 381

Query: 405  KDDQLTTFVPPKQTVEALLESGYSLLKEQQLIMENKLSKEYMKNMDD 265
            KD++L  F PP+QT+EALLESG+SL++EQQLIME KLSKEYMKN+DD
Sbjct: 382  KDEKLPEFTPPEQTMEALLESGHSLIREQQLIMETKLSKEYMKNVDD 428


>ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
            precursor, putative [Ricinus communis]
            gi|223547789|gb|EEF49281.1| Ribulose bisphosphate
            carboxylase/oxygenase activase, chloroplast precursor,
            putative [Ricinus communis]
          Length = 428

 Score =  502 bits (1293), Expect = e-140
 Identities = 241/287 (83%), Positives = 267/287 (93%)
 Frame = -1

Query: 1125 VVCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRA 946
            ++CHIVKNYI HLLNVKVPLILGIWGGKGQGKSFQTEL+FQAMG+EPVIMSAGELES+RA
Sbjct: 142  MICHIVKNYIAHLLNVKVPLILGIWGGKGQGKSFQTELVFQAMGIEPVIMSAGELESERA 201

Query: 945  GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSD 766
            GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNL D
Sbjct: 202  GEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLVD 261

Query: 765  NTTRVSVGQDWRDSDISHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCK 586
            N TRVS GQDWR+SDI++RIPIIVTGND STIYAPLIRDGRM+KF+WQP  EDI NIV +
Sbjct: 262  NPTRVSTGQDWRESDITNRIPIIVTGNDFSTIYAPLIRDGRMEKFFWQPNQEDIVNIVHR 321

Query: 585  MYEKDGISREAVVNVVDSFPNQALDFYGALRSRTYDRSVSKWVDDIGGIKNLGTTLLKRR 406
            MYEKDGISR+ VV++V +FPNQALDFYGALRSRTYD S+SKW+DDIGG++NLG  LLKRR
Sbjct: 322  MYEKDGISRDEVVSIVKTFPNQALDFYGALRSRTYDMSISKWIDDIGGVENLGNKLLKRR 381

Query: 405  KDDQLTTFVPPKQTVEALLESGYSLLKEQQLIMENKLSKEYMKNMDD 265
            K++ L  + PP+QTVEAL ESGYSL++EQQLIME KLSKEYMKN+DD
Sbjct: 382  KNETLPVYTPPEQTVEALFESGYSLIREQQLIMETKLSKEYMKNIDD 428