BLASTX nr result

ID: Coptis21_contig00014115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014115
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002589689.1| hypothetical protein BRAFLDRAFT_100816 [Bran...    73   7e-11
gb|EMC82409.1| Repetin, partial [Columba livia]                        62   1e-07

>ref|XP_002589689.1| hypothetical protein BRAFLDRAFT_100816 [Branchiostoma floridae]
           gi|229274871|gb|EEN45700.1| hypothetical protein
           BRAFLDRAFT_100816 [Branchiostoma floridae]
          Length = 374

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 52/132 (39%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
 Frame = +3

Query: 426 SFVGTELYFVGTAETGFVIPGMIIHHVEPSQGHALHEEEGPSQGHSPLKGEDLCQGHLLH 605
           S  G  L       TG + P       +PSQGH       PSQGH      D  QGH+  
Sbjct: 238 SHAGVSLATPRVERTGHITP----FRTDPSQGHITPFRTDPSQGHITPFRTDPSQGHITP 293

Query: 606 VE-DPSQGRLLHEEKYPDQGHLLHVE-DPSQSHLLCV-GDPSQGHLLHV-GDPSQGHLL- 770
              DPSQG +      P QGH+     DPSQ H+     DPSQGH+     DPSQGH+  
Sbjct: 294 FRTDPSQGHITPFRTDPSQGHITPFRTDPSQGHITPFRTDPSQGHITPFRTDPSQGHITP 353

Query: 771 LEGDPSPGHLLL 806
              DPS GH+ L
Sbjct: 354 FRTDPSQGHITL 365


>gb|EMC82409.1| Repetin, partial [Columba livia]
          Length = 243

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 57/123 (46%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
 Frame = +3

Query: 480 IPGMIIHHVEPS--QGHALHEEEGPSQGHSPLKGEDLCQGHLLHVEDPS--QGRLLHEEK 647
           + G ++HH  PS  QGH LH      QGH    G    QGH+LH   PS  QG +LH   
Sbjct: 77  VQGHVLHH-GPSWVQGHVLHHGPSWVQGHVLHHGPSWVQGHVLH-HGPSWVQGHVLHHGP 134

Query: 648 YPDQGHLLHVEDPS--QSHLLCVGDPS--QGHLLHVGDPS--QGHLLLEGDPS--PGHLL 803
              QGH+LH   PS  Q H+L  G PS  QGH+LH G PS  QGH+L  G PS   GH+L
Sbjct: 135 SWVQGHVLH-HGPSWVQGHVLHHG-PSWVQGHVLHHG-PSWVQGHVLHHG-PSWVQGHVL 190

Query: 804 LEG 812
             G
Sbjct: 191 HHG 193



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 52/109 (47%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
 Frame = +3

Query: 516 QGHALHEEEGPSQGHSPLKGEDLCQGHLLHVEDPS--QGRLLHEEKYPDQGHLLHVEDPS 689
           QGH LH      QGH    G    QGH+LH   PS  QG +LH      QGH+LH   PS
Sbjct: 6   QGHVLHHGPSWVQGHVLHHGPSWVQGHVLH-HGPSWVQGHVLHHGPSWVQGHVLH-HGPS 63

Query: 690 --QSHLLCVGDPS--QGHLLHVGDPS--QGHLLLEGDPS--PGHLLLEG 812
             Q H+L  G PS  QGH+LH G PS  QGH+L  G PS   GH+L  G
Sbjct: 64  WVQGHVLHHG-PSWVQGHVLHHG-PSWVQGHVLHHG-PSWVQGHVLHHG 109


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