BLASTX nr result

ID: Coptis21_contig00014110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014110
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246...   114   6e-24
gb|AFK37119.1| unknown [Lotus japonicus]                              109   3e-22
ref|XP_003624658.1| Protein vip1 [Medicago truncatula] gi|871626...   108   6e-22
ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232...   107   1e-21
ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206...   107   1e-21

>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
           gi|296089289|emb|CBI39061.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/73 (80%), Positives = 65/73 (89%)
 Frame = +3

Query: 54  METRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALL 233
           M+TRTV+VGHVSDLAGEREI EFFSFSG+IEHVEI    GQ + AFVTFKD KALEIALL
Sbjct: 1   MQTRTVQVGHVSDLAGEREIHEFFSFSGDIEHVEILRDSGQLRTAFVTFKDPKALEIALL 60

Query: 234 LSGATIVDQIVSI 272
           LSGATIVDQ+V+I
Sbjct: 61  LSGATIVDQVVTI 73


>gb|AFK37119.1| unknown [Lotus japonicus]
          Length = 272

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/73 (80%), Positives = 63/73 (86%)
 Frame = +3

Query: 54  METRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALL 233
           M+TRTV+V  VS+LAGEREI EFFSFSGEIEHVEI S  G+ K  FVTFKDAKALEIALL
Sbjct: 1   MQTRTVQVKQVSNLAGEREIHEFFSFSGEIEHVEILSEYGKSKTTFVTFKDAKALEIALL 60

Query: 234 LSGATIVDQIVSI 272
           LSGATIV QIVSI
Sbjct: 61  LSGATIVGQIVSI 73


>ref|XP_003624658.1| Protein vip1 [Medicago truncatula] gi|87162638|gb|ABD28433.1|
           RNA-binding region RNP-1 (RNA recognition motif)
           [Medicago truncatula] gi|355499673|gb|AES80876.1|
           Protein vip1 [Medicago truncatula]
          Length = 265

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/74 (75%), Positives = 64/74 (86%)
 Frame = +3

Query: 54  METRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALL 233
           M+TRTV+V  +SDLA EREI EFFSFSGEIEH++I    G+PK AFVTFKD +ALEIALL
Sbjct: 1   MQTRTVQVKQLSDLATEREIHEFFSFSGEIEHIQIVREYGKPKTAFVTFKDPRALEIALL 60

Query: 234 LSGATIVDQIVSIN 275
           LSGATIVDQIVSI+
Sbjct: 61  LSGATIVDQIVSIS 74


>ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232015 [Cucumis sativus]
          Length = 271

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = +3

Query: 48  LKMETRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIA 227
           ++ +TRTV+V HVSDLA EREI EFFSFSGEIEH+EI    G+ K AFVTF D KALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 228 LLLSGATIVDQIVSI 272
           LLLSGATIVD+IVSI
Sbjct: 61  LLLSGATIVDKIVSI 75


>ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206093 [Cucumis sativus]
          Length = 271

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = +3

Query: 48  LKMETRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIA 227
           ++ +TRTV+V HVSDLA EREI EFFSFSGEIEH+EI    G+ K AFVTF D KALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 228 LLLSGATIVDQIVSI 272
           LLLSGATIVD+IVSI
Sbjct: 61  LLLSGATIVDKIVSI 75


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