BLASTX nr result

ID: Coptis21_contig00014089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014089
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532283.1| Rho GDP-dissociation inhibitor, putative [Ri...   105   5e-21
ref|XP_002520560.1| Rho GDP-dissociation inhibitor, putative [Ri...   104   7e-21
ref|XP_003518574.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   103   1e-20
ref|XP_003545071.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   103   1e-20
ref|NP_187445.1| Rho GDP-dissociation inhibitor 1 [Arabidopsis t...   102   4e-20

>ref|XP_002532283.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223528017|gb|EEF30098.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 246

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/51 (88%), Positives = 51/51 (100%)
 Frame = +1

Query: 1   PYTHVMPEETTPSGIFARGSYSARTKFIDDDNKCYLEINYTFDIRKEWASS 153
           PYTHVMPEETTPSG+FARGSYSA++KF+DDDNKCYLEINYTFDIRKEWA++
Sbjct: 196 PYTHVMPEETTPSGMFARGSYSAKSKFLDDDNKCYLEINYTFDIRKEWAAT 246


>ref|XP_002520560.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223540220|gb|EEF41793.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 243

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +1

Query: 1   PYTHVMPEETTPSGIFARGSYSARTKFIDDDNKCYLEINYTFDIRKEWASS 153
           PYTH MPEETTPSGIFARGSYSAR+KF+DDDNKCYLEINYTFDIRKEW S+
Sbjct: 193 PYTHEMPEETTPSGIFARGSYSARSKFVDDDNKCYLEINYTFDIRKEWQST 243


>ref|XP_003518574.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max]
          Length = 233

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +1

Query: 1   PYTHVMPEETTPSGIFARGSYSARTKFIDDDNKCYLEINYTFDIRKEWA 147
           PYTH MPEETTPSG+FARGSYSAR+KF+DDDNKCYLEINYTFDIRKEWA
Sbjct: 185 PYTHEMPEETTPSGLFARGSYSARSKFLDDDNKCYLEINYTFDIRKEWA 233


>ref|XP_003545071.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max]
          Length = 227

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +1

Query: 1   PYTHVMPEETTPSGIFARGSYSARTKFIDDDNKCYLEINYTFDIRKEWA 147
           PYTH MPEETTPSG+FARGSYSAR+KF+DDDNKCYLEINYTFDIRKEWA
Sbjct: 179 PYTHEMPEETTPSGLFARGSYSARSKFLDDDNKCYLEINYTFDIRKEWA 227


>ref|NP_187445.1| Rho GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|21759146|sp|Q9SFC6.1|GDIR_ARATH RecName: Full=Rho
           GDP-dissociation inhibitor 1; Short=AtRhoGDI1; Short=Rho
           GDI-1 gi|6648200|gb|AAF21198.1|AC013483_22 putative RHO
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|15866274|gb|AAL10299.1|AF412276_1 Rho
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|21553639|gb|AAM62732.1| putative RHO GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
           gi|26451537|dbj|BAC42866.1| putative RHO
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|28973347|gb|AAO63998.1| putative RHO GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
           gi|332641093|gb|AEE74614.1| Rho GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
          Length = 240

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = +1

Query: 1   PYTHVMPEETTPSGIFARGSYSARTKFIDDDNKCYLEINYTFDIRKEW 144
           PY HVMPEETTPSG+FARGSYSARTKF+DDDNKCYLEINY+FDIRKEW
Sbjct: 190 PYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237


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