BLASTX nr result

ID: Coptis21_contig00014068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014068
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529492.1| PREDICTED: uncharacterized protein LOC100785...    90   1e-15
ref|XP_003571238.1| PREDICTED: uncharacterized protein LOC100836...    79   2e-12
ref|XP_002523138.1| conserved hypothetical protein [Ricinus comm...    78   5e-12
tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    76   2e-11
ref|XP_003569995.1| PREDICTED: UPF0406 protein C16orf57 homolog ...    75   4e-11

>ref|XP_003529492.1| PREDICTED: uncharacterized protein LOC100785875 [Glycine max]
          Length = 375

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 7/285 (2%)
 Frame = -2

Query: 934 WSEGMDRVLVHTLQKQLSLGNKSKSGWKSIAFTAVINNMWXXXXXXXXXXXIMNRLKTWR 755
           W++ MD  L   L  Q+ LGN+ +  +K+ A+ A +  +            I+NRLK W+
Sbjct: 93  WTDEMDHCLTELLVNQVMLGNRLEKFFKTSAYIAALTALNERFDLNLTKENIINRLKIWK 152

Query: 754 KMNVAVKELLGLDGFSWDGESKTLRANEDVWRNVLKTRKHLRQYKGKALAFYQEIAQLIG 575
           K    +KE+L    F WD   K + A +  W   +K   + R  + + +  Y E+  ++G
Sbjct: 153 KQYDVLKEMLSQGRFEWDEGCKMVVATDLAWDEYIKKHPYARHLRDRHIENYHELGMIVG 212

Query: 574 DEAKG-------PMGITHIVTNEERTATEKVQXXXXXXXXXXXGWTAGDVRTEIPVQTHA 416
           DE               ++  N E  A  +                A D       QT A
Sbjct: 213 DEQGSGNWSENFERFDVNLTPNYEEHA--EAPALVLADVQISPDANASDEVQGSSEQTRA 270

Query: 415 FSSSSPSRAGEQTRRKRKRFLVPGWVEEMSKVRLEIGRVASAMECRNQIDDPLWDQCTRA 236
             SSS S + + ++R+R   ++   +E MS +  +I R+A A+   N+      ++    
Sbjct: 271 RPSSSQSHSKQPSKRRRTSDVM---LEMMSVMAADISRIADALSENNK--TVCLEEVVEK 325

Query: 235 IEAINDLDEDAKLAALEMFLGSLDKRRMFISLKDSQQRTWILRKL 101
           ++ + D D+D  + A E       +  MF+ L +  ++ W+L++L
Sbjct: 326 VQNMPDFDDDLIIEACEYLCFDEKRALMFLKLDERLRKKWLLKRL 370


>ref|XP_003571238.1| PREDICTED: uncharacterized protein LOC100836964 [Brachypodium
           distachyon]
          Length = 269

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 2/284 (0%)
 Frame = -2

Query: 946 GNLFWSEGMDRVLVHTLQKQLSLGNKSKSGWKSIAFTAVINNMWXXXXXXXXXXXIMNRL 767
           G L WS+ MD+ L+    ++ + G+++++GWK   + A + N+            I++R 
Sbjct: 10  GYLTWSDSMDKALLDVFVERYNKGDRAQNGWKPRVYIAAVKNVREKCEMEITMENIISRS 69

Query: 766 KTWRKMNVAVKELLGLDGFSWDGESKTLRA-NEDVWRNVLKTRKHLRQYKGKALAFYQEI 590
           KT+ K +  + ++L   GF WD ++  +   ++DVW   +   K    Y+ K + F+  I
Sbjct: 70  KTFDKYHAIISKMLSQSGFGWDWDNNKISVDSDDVWNTYVHANKDATSYRHKTIKFWDMI 129

Query: 589 AQLIGDEAKGPMGITHIVTNEERTATEKVQXXXXXXXXXXXGWTAGDVRTEIPVQTHAFS 410
           + +   +     G         RTA E                +A ++  E    +    
Sbjct: 130 SLVYSKDRANGAG--------ARTAAE----------------SAAEMAAENGNNSKDTD 165

Query: 409 SSSPSRAGEQTRRKRKRFLVPGWVEEMSKVRLEIGRVA-SAMECRNQIDDPLWDQCTRAI 233
           ++S ++      RK+KR+     +  M   +L+    A  A  C         ++   A+
Sbjct: 166 ATSSTQVDGD--RKKKRYRSDDSIASMLGEKLDNFTAAFQADVCEPPPKPASPEEILAAL 223

Query: 232 EAINDLDEDAKLAALEMFLGSLDKRRMFISLKDSQQRTWILRKL 101
           +AI  L ED  LAA E+ + +  K +   +L    ++ WIL+++
Sbjct: 224 DAIPGLGEDDVLAAYEILVSNDHKFKSLQALPGGMKKKWILKQV 267


>ref|XP_002523138.1| conserved hypothetical protein [Ricinus communis]
            gi|223537700|gb|EEF39323.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 466

 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 16/309 (5%)
 Frame = -2

Query: 979  QSDFQVDGKSNGN---LFWSEGMDRVLVHTLQKQLSLGNKSKSGWKSIAFTAVINNMWXX 809
            Q+   V G +  N    +W   MDR  +  + + +  GN+    ++  A+  +I +    
Sbjct: 158  QATTNVSGSTASNRTRTYWQPPMDRYFIDLMLEHMRKGNQIDGVFRKQAWMDMITSFNAK 217

Query: 808  XXXXXXXXXIMNRLKTWRKMNVAVKELLGLDGFSWDGESKTLRANEDVWRNVLKTRKHLR 629
                     + NR KT R+ +  +K LL L GFSWD   + + A++ VW++ +KTR   R
Sbjct: 218  FGFNYDVDVLKNRYKTLRRQHNVIKNLLELPGFSWDDTRQMVTADDYVWQDYIKTRTDAR 277

Query: 628  QYKGKALAFYQEIAQLIGDEAKGPMGITHIVTNEERTATEKVQXXXXXXXXXXXGWTAGD 449
            Q+  + + +Y+++  +  D+             E +   + V+              A  
Sbjct: 278  QFMTRPVPYYKDLCMICNDQNFDESDCCSAQYLELQNDFQDVKAPRPSQCFHS---PALS 334

Query: 448  VRTEIPVQTHAFSSSSPSRAGEQTRRKRKRF----------LVPGWVEEMSKVRLEIGRV 299
            V TE  +     S  + S+       K+++              G  E M+    E+   
Sbjct: 335  VSTEEEIGDMLESVDTGSKTSVLNENKKRQSENQSNSGHFKKARGKEEGMANALREMATA 394

Query: 298  ASAMECRNQIDDP---LWDQCTRAIEAINDLDEDAKLAALEMFLGSLDKRRMFISLKDSQ 128
             S++  + + ++      +   +A++ ++D+DED  L A + FL    K + F++L+   
Sbjct: 395  VSSLSDKRKDENTNSISIENVVKAVQDLSDMDEDLILDACD-FLEDEMKAKTFMALEVKL 453

Query: 127  QRTWILRKL 101
            ++ W+LRKL
Sbjct: 454  RKKWLLRKL 462



 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
 Frame = -2

Query: 949 NGN----LFWSEGMDRVLVHTLQKQLSLGNK------SKSGWKSIAFTAVINNMWXXXXX 800
           NGN      W+  MDR  +  L +Q+S GNK      SK  WK++  T + N  +     
Sbjct: 7   NGNDRLRTVWTPEMDRYFIGLLLEQVSKGNKFDDHLFSKRAWKNM--TLLFNTKFKFRYE 64

Query: 799 XXXXXXIMNRLKTWRKMNVAVKELLGLDGFSWDGESKTLRANEDVWRNVLKTRKHLRQYK 620
                   NR KT R +  AVK+LL  +GFSWD   + + A+ DVW   +K     R Y+
Sbjct: 65  KDVLK---NRHKTLRNLYTAVKKLLDQNGFSWDNNRQMVTADNDVWDEYIKMHPDARAYR 121

Query: 619 GKALAFYQEIAQLIGD 572
            K +  Y+++  + GD
Sbjct: 122 IKTIPHYKDLCLIYGD 137


>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 8/295 (2%)
 Frame = -2

Query: 961 DGKSNGNLFWSEGMDRVLVHTLQKQLSLGNKSKSGWKSIAFTAVINNMWXXXXXXXXXXX 782
           D K+ G + W++ MD+VL+ T     + G++ ++GWKS  +TAV+ N+            
Sbjct: 5   DKKTRGYVPWNDEMDKVLLDTFVDYYNKGDRCQNGWKSHVYTAVVKNVCEKCNVTITKEN 64

Query: 781 IMNRLKTWRKMNVAVKELLGLDGFSWDGESKTLRANED-VWRNVLKTRKHLRQYKGKALA 605
           I +R KT+ K    +  LL   GF WD E   L+ + D VW   ++  K  + Y+ K + 
Sbjct: 65  ISSRSKTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYIERNKEAKGYRHKVVK 124

Query: 604 FYQEIAQLIGDEAKGPMGITHIVTNEERTATEKVQXXXXXXXXXXXGWTAGDVRTEIPVQ 425
           F+                +  +V N+++   E  +             TA +   E+  +
Sbjct: 125 FWD---------------LLSLVYNKDQANGEGAK-------------TAAESSKEMAKE 156

Query: 424 THAFSSSSPSRAGEQTRRKRKR---FLVPGWVEEMSKVRLEIGRVASAMECRNQIDD--- 263
                  +P      +  KR+R        W ++          + SA++     DD   
Sbjct: 157 NDTGGKDAPYSVSSSSSLKRQRSDDSFNSIWCDKFD-------MLTSALK-----DDGPK 204

Query: 262 -PLWDQCTRAIEAINDLDEDAKLAALEMFLGSLDKRRMFISLKDSQQRTWILRKL 101
            P   +   A++ +  LDED +L   ++   +  K    ++L   +++ W++ +L
Sbjct: 205 LPSSAEVLAALQEVEGLDEDTELELYDILTSNARKFESMMALPMERRKRWLMMQL 259


>ref|XP_003569995.1| PREDICTED: UPF0406 protein C16orf57 homolog [Brachypodium distachyon]
          Length = 275

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = -2

Query: 1147 EEKEESTRLPPPPIDLLTPQNSLDLAEIGTGSRVRSFPHVDGNYALHVSIPV 992
            E +E S  LPPPP+DLL P N +D +++  GSR+RSFPHV+GNYALHV IPV
Sbjct: 23   ENQEASALLPPPPLDLLQPPNFVDYSKMAQGSRIRSFPHVEGNYALHVYIPV 74


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