BLASTX nr result

ID: Coptis21_contig00014056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014056
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320216.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20
ref|XP_002302653.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|XP_003626584.1| hypothetical protein MTR_7g117980 [Medicago ...    97   8e-18
ref|XP_002533331.1| conserved hypothetical protein [Ricinus comm...    96   1e-17
gb|ABK24731.1| unknown [Picea sitchensis]                              83   1e-13

>ref|XP_002320216.1| predicted protein [Populus trichocarpa] gi|222860989|gb|EEE98531.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  105 bits (261), Expect = 2e-20
 Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
 Frame = -3

Query: 498 KEKDSRKKVDGDHEDAGVRMITIAGENKGAYMDLGSSKKKSNL--NPQQLHKN-NPRTRN 328
           KEK S KK+  D ED G+R+ITIAGENKGA+M++  S KK     N   L+K  NPR+  
Sbjct: 304 KEKGSGKKISSDSEDVGMRVITIAGENKGAFMEVIRSPKKHFFEGNSHTLNKKGNPRSEG 363

Query: 327 XXXXXXXXXXXXXXXXXXXXXXENRTSTTGATPMKAFVNSNVQGVNNSLLLNSSCAHSDP 148
                                  ++  + G +PM AF+NSNVQGVNNS++ NSSC+H DP
Sbjct: 364 SDWGSQSSSGEEGNSKKDKN---HKGRSMGPSPMSAFMNSNVQGVNNSIVYNSSCSHHDP 420

Query: 147 GVHFSISKKPT 115
           GVH ++S+KP+
Sbjct: 421 GVHVALSRKPS 431


>ref|XP_002302653.1| predicted protein [Populus trichocarpa] gi|222844379|gb|EEE81926.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
 Frame = -3

Query: 498 KEKDSRKKVDGDHEDAGVRMITIAGENKGAYMDLGSSKKKSNLNPQQ--LHKN-NPRTRN 328
           KEK +RKK   D ED G+++ITIAGENKGA+M++  S KK         LHK  NP++  
Sbjct: 314 KEKGNRKKNSSDSEDGGMKVITIAGENKGAFMEVIRSPKKQVFEGTSHFLHKKGNPKSEG 373

Query: 327 XXXXXXXXXXXXXXXXXXXXXXENRTSTTGATPMKAFVNSNVQGVNNSLLLNSSCAHSDP 148
                                        G +P+ +F+NSNVQGVNNS++ NSSC+H DP
Sbjct: 374 SDSSSSEEGNSKKKDKNPNG------KAMGPSPLSSFMNSNVQGVNNSIVYNSSCSHHDP 427

Query: 147 GVHFSISKKP 118
           GVH ++S+KP
Sbjct: 428 GVHVALSRKP 437


>ref|XP_003626584.1| hypothetical protein MTR_7g117980 [Medicago truncatula]
           gi|355501599|gb|AES82802.1| hypothetical protein
           MTR_7g117980 [Medicago truncatula]
          Length = 371

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 55/128 (42%), Positives = 73/128 (57%)
 Frame = -3

Query: 501 KKEKDSRKKVDGDHEDAGVRMITIAGENKGAYMDLGSSKKKSNLNPQQLHKNNPRTRNXX 322
           K  + S++K   D ED+G+R+ITIAGEN+GAYM+L  S+KK    P  LHK     +   
Sbjct: 232 KGRESSKEKKFSDSEDSGMRVITIAGENRGAYMELVQSQKKHQ--PNYLHKKGNTIK--V 287

Query: 321 XXXXXXXXXXXXXXXXXXXXENRTSTTGATPMKAFVNSNVQGVNNSLLLNSSCAHSDPGV 142
                                N+  T  + PM A++NSNVQ VNNSLL ++SC+H DPGV
Sbjct: 288 DGGESESSSADEGKINKKDKNNKGRTKSSIPMAAYMNSNVQCVNNSLLYHASCSHHDPGV 347

Query: 141 HFSISKKP 118
             S+SKKP
Sbjct: 348 RLSLSKKP 355


>ref|XP_002533331.1| conserved hypothetical protein [Ricinus communis]
           gi|223526836|gb|EEF29052.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
 Frame = -3

Query: 663 EPESKTVVVAEKKNAFPREE----KEWKHDEMXXXXXXXXXXXXXXSEGGSAAITVHH-- 502
           E E+K  +VAE+K    ++     K W  +                   G    T  H  
Sbjct: 294 ETEAKIPLVAEQKTVVVQKTIDKPKPWLTNGGNSERDLVNAVKSSIGLNGKQETTKDHGE 353

Query: 501 KKEKDSRKKVDGDHEDAGVRMITIAGENKGAYMDLGSSKKKSNL---NPQQLHK--NNPR 337
            KEK   KK+    ED G+R+IT+AGENKGA+M++  S  K ++   +P  LHK  N+P+
Sbjct: 354 TKEKVLHKKIFSGSEDGGMRVITVAGENKGAFMEVIRSPNKKHVFEGSPHHLHKKDNDPK 413

Query: 336 TRNXXXXXXXXXXXXXXXXXXXXXXENRTSTTG--ATPMKAFVNSNVQGVNNSLLLNSSC 163
           +                        +      G  + PM AF+NSNVQGVNNS++ NSSC
Sbjct: 414 SDGIKWISYSSNGSSSEGEGKPKMKDKNHKGKGMNSLPMTAFMNSNVQGVNNSIVYNSSC 473

Query: 162 AHSDPGVHFSISKK 121
            H DPGVH ++S+K
Sbjct: 474 THHDPGVHLALSRK 487


>gb|ABK24731.1| unknown [Picea sitchensis]
          Length = 358

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
 Frame = -3

Query: 507 HHKKEKDSRKKV--DGDH--EDAGVRMITIAGENKGAYMDLGSSKKKSNLNPQQLHKNNP 340
           H   E   ++K+  +GD   +D GVR+IT+AGEN+GA MD+GS  +K+++   Q   + P
Sbjct: 213 HRLSELHGQQKLGSNGDQKMQDLGVRVITLAGENRGAIMDMGSESRKNDVLDVQRVNHKP 272

Query: 339 RTRNXXXXXXXXXXXXXXXXXXXXXXENRTSTTGATPMKAFVNSNVQGVNNSLLLNSSCA 160
              N                       +R    G  P+ AFVNSN+Q  NNS+L NS+C 
Sbjct: 273 GGANKNEESPDGN--------------HRQKAAG--PVNAFVNSNIQAANNSILYNSTCP 316

Query: 159 HSDPGVHFSISKKPTT 112
           H DPGV  ++S  P T
Sbjct: 317 HRDPGVRLALSNNPIT 332


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