BLASTX nr result

ID: Coptis21_contig00014004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014004
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...   133   6e-29
dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal...    97   8e-18
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    94   5e-17
gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thali...    92   3e-16
pir||D85079 hypothetical protein AT4g08060 [imported] - Arabidop...    86   1e-14

>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score =  133 bits (335), Expect = 6e-29
 Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 24/297 (8%)
 Frame = +2

Query: 173  KSQKFQEMRENQELHHTCSRQGYARLEYQMQKESPNPSSITRVDVWCKGHTKKSGEPSNS 352
            KS+KF+ M++ Q L HTCSR+GYARL  +M+K  P+ SS++RV VW K H KK G P NS
Sbjct: 842  KSEKFKSMKKKQ-LPHTCSRKGYARLAEEMKKGCPDSSSVSRVAVWAKAHRKKDGNPVNS 900

Query: 353  IVAEQMKKMKEIRDSATSNSLNHSIQNDALSQVLGPDCYSRVRGKGAGVTPLKLGVVSQN 532
             VAE ++++++I D+    + ++++ N+A+S+VLG D        G GVT  K  ++SQ 
Sbjct: 901  QVAEALERIEQI-DNEGIKTTSNNVGNEAISKVLGSD-RGDTGALGFGVTVKKFSLLSQL 958

Query: 533  KQLVAQLQEEVLTVKKDMAQMVNLVNSQNELIRSLLAATLNTQKGE-----------SQK 679
                A+L+E              ++   N +I   ++  L   +G            SQ+
Sbjct: 959  DGHYAELEE--------TNDNEGIITGSNNVINDAISKVLGPDQGGALGFGVTVKKFSQR 1010

Query: 680  AMY----------EQVIPSTNAPITSLLQGQGIGSSDXXXXXXXXXXXXXXSNDQGIQTT 829
              Y          E  +    + ++ +L+ QG GS                +N  G    
Sbjct: 1011 EHYTKLEEKYKKMEGEMSEMRSLMSQILKSQGNGSEHLSNATNEQIVNNVATNPIG---- 1066

Query: 830  FSTTLLQSHGQ---QCKLLNWAAPHELVAKGRWESDDPIKPVHGVPLADNTSKVWVE 991
             S+ L  +      +CK+L+W    E+VA+GRW S+DP   VH VPL     KVWV+
Sbjct: 1067 -SSPLSINDNNALPKCKMLDWCGTGEVVAEGRWSSNDPKVIVHHVPLGPQAVKVWVD 1122



 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 39/96 (40%), Positives = 57/96 (59%)
 Frame = +2

Query: 107 NKCGLPEWEMFLKQMSRRKFILKSQKFQEMRENQELHHTCSRQGYARLEYQMQKESPNPS 286
           N   + +W  F+K+     F  KS+KF+ M++ Q L HTCSR+GYARL  +M+K   + S
Sbjct: 551 NVQSMHDWMDFVKEKKSATFKAKSEKFKSMKKMQ-LPHTCSRKGYARLAEEMRKSCLDSS 609

Query: 287 SITRVDVWCKGHTKKSGEPSNSIVAEQMKKMKEIRD 394
           S+TR+ +  K H KK   P NS V E +   K++ D
Sbjct: 610 SVTRIALLAKAHRKKDENPVNSQVTETLGMEKKLSD 645


>dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana]
          Length = 1516

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 3/173 (1%)
 Frame = +2

Query: 128  WEMFLKQMSRRKFILKSQKFQEMRENQELHHTCSRQGYARLEYQMQKESPNPSSITRVDV 307
            W  ++K      F   S K++ +R+ Q + HT SR+G   L ++M+K+S NP  +TR  V
Sbjct: 1045 WNSWVKNRKTTAFKEISDKYRMLRKAQ-IPHTTSRKGMISLAHEMKKKSSNPKLVTRSKV 1103

Query: 308  WCKGHTKKSGEPSNSIVAEQMKKMKEIRDSATSNSLNHSIQNDALSQVLGPDCYSRVRGK 487
            W  GHT   G P     AE ++K+K I DS   +S    ++ DA+SQVLG D   R+RG 
Sbjct: 1104 WIAGHTHSDGRPVKPEFAETIEKIKSI-DSEMDSSSFTDLKEDAVSQVLGKDKPGRLRGM 1162

Query: 488  GAGVTPLKLGVVSQNKQLVAQL---QEEVLTVKKDMAQMVNLVNSQNELIRSL 637
            G GVT  KL  +      V +L   Q ++LT  +D+  +V+ + ++ E +  +
Sbjct: 1163 GRGVTATKLAFMLARDSHVEKLEATQADLLTKLEDLQNVVHGLAAKKEHVEEV 1215


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
 Frame = +2

Query: 125  EWEMFLKQMSRRKFILKSQKFQEMRENQELHHTCSRQGYARLEYQMQKESPNPSSITRVD 304
            EW  F+K  +   F + S K++E R NQ + HT SR+G  RL   M+ ES +PS +TR+ 
Sbjct: 1032 EWRKFVKIKTSAAFKVVSDKYKERRRNQ-IPHTTSRKGMVRLAEDMKLESGDPSEVTRLK 1090

Query: 305  VWCKGHTKKSGEPSNSIVAEQMKKMKEIRDSATSNSLNHSIQNDALSQVLGPDCYSRVRG 484
             W K  TKK G P N+  AEQ+       D   +++   + + D LSQ+LGPD   R+R 
Sbjct: 1091 FWVKSRTKKDGTPVNTNAAEQIAAELVGSDGPPTSA---NPEEDHLSQLLGPDNPGRLRA 1147

Query: 485  KGAGVTPLKLGVVSQNKQLVAQLQE-EVLTVKKDMAQMVNLVNSQNE 622
               G++  KL  +   ++ +  ++E +VL +KK +       NSQN+
Sbjct: 1148 MSRGMSKTKLACLQVKRKCMTDMEEKQVLLLKKGLRG-----NSQNK 1189


>gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thaliana]
          Length = 623

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 16/304 (5%)
 Frame = +2

Query: 128  WEMFLKQMSRRKFILKSQKFQEMRENQELHHTCSRQGYARLEYQMQKESPNPSSITRVDV 307
            W   +K  + ++F + S  ++E R  Q + HT SR+G  RL   M+KESPNPS ++R+ V
Sbjct: 217  WSKLVKLKTSKEFKVVSDSYKERRSKQ-ISHTTSRRGMVRLAEHMKKESPNPSEVSRLQV 275

Query: 308  WCKGHTKKSGEPSNSIVAEQMKKMKEIRDSATSNSLNHSIQNDALSQVLGPDCYSRVRGK 487
            W K  T+K G P N+   E  K   EI  S T +S     Q D+LSQ+LGPD   R+R  
Sbjct: 276  WIKSRTRKDGTPVNTNTGE--KIASEIVKSDTPSSACFEGQ-DSLSQLLGPDNPGRMRAM 332

Query: 488  GAGVTPLKLGVVSQNKQLVAQLQEEVLTVKKDMAQMVNLVNSQNELIRSLLAATLNTQKG 667
            G      KL       + +A+      T  K   + + +   Q+  + S  AA    ++ 
Sbjct: 333  GRNKNKTKLACFQMKNKCMAE------TEAKQAHRQLKVNELQDPDVASNSAARSVNKRS 386

Query: 668  ESQKAMYE-----QVIPSTNAPITS----LLQGQGIGSSD-----XXXXXXXXXXXXXXS 805
            + +  + +       I +    ITS    L+    +G SD                    
Sbjct: 387  QPKCILIDWTGNGNAIIAEGRIITSDPDDLVNDCRLGPSDVKVLVDAATVPDAYLWRLEL 446

Query: 806  NDQGIQTTFSTTLL--QSHGQQCKLLNWAAPHELVAKGRWESDDPIKPVHGVPLADNTSK 979
            N   I++     +     + +Q +    +    +VA+GRW++ D    V+G+P   N+ K
Sbjct: 447  NMCTIESAIVKMIAWPSLNDEQMQATGLSLDDVVVAEGRWQTQDCDALVNGIPPRPNSVK 506

Query: 980  VWVE 991
            ++V+
Sbjct: 507  IFVD 510


>pir||D85079 hypothetical protein AT4g08060 [imported] - Arabidopsis thaliana
            gi|5724772|gb|AAD48076.1|AF160183_3 contains similarity
            to Podocoryne carnea neuropeptide Pol-RFamide II
            precursor (GB;X82896); maybe a pseudogene [Arabidopsis
            thaliana] gi|7267446|emb|CAB81143.1| putative protein
            [Arabidopsis thaliana]
          Length = 756

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 14/287 (4%)
 Frame = +2

Query: 182  KFQEMRENQELHHTCSRQGYARLEYQMQKESPNPSSITRVDVWCKGHTKKSGEPSNSIVA 361
            KF+E + NQ+  +               +   NP+ +TR+ VW K  TKK G P N+  A
Sbjct: 262  KFREAKTNQQRMNL--------------RPKTNPTEVTRLKVWVKSRTKKDGTPVNTNAA 307

Query: 362  EQMKKMKEIRDSA-TSNSLNHSIQNDALSQVLGPDCYSRVRGKGAGVTPLKLGVVSQNKQ 538
            E++KK  EI  S   SN  N +   D+LSQ+LGPD   R+R  G  +   KL       +
Sbjct: 308  EKIKKAAEIVSSGPQSNGTNEA--QDSLSQLLGPDNRGRLRAMGRNMNKTKLACFQVKSK 365

Query: 539  LVAQLQEEVLTVKKDMAQMVNLVNSQNELIRSLLAATLNTQKGESQKAMYEQVI---PST 709
             +A++Q++   +++ + ++  +++     + + L      Q    Q +  + ++     T
Sbjct: 366  CMAEMQQKQDQLQQKVNELQEVIDKIKNHVNTCLLIHKANQSSVDQGSQPKCILMDWAGT 425

Query: 710  NAPIT----------SLLQGQGIGSSDXXXXXXXXXXXXXXSNDQGIQTTFSTTLLQSHG 859
            +A +            ++ G  +G ++                    +   +     ++G
Sbjct: 426  DATVAEGCIISSDPDEIVNGSRLGPTNVKMIAWPVAMCVSLEEKLNPE-DIAQGPRPTYG 484

Query: 860  QQCKLLNWAAPHELVAKGRWESDDPIKPVHGVPLADNTSKVWVEEVV 1000
             + KLL+ ++   +VA+GRW++ D    V+G+PL     KV+V+ ++
Sbjct: 485  NKWKLLDLSSNDVIVAEGRWQTKDQSALVNGLPLGPAAVKVFVDVIL 531


Top