BLASTX nr result

ID: Coptis21_contig00014002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014002
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein ...   150   1e-34
emb|CBI27694.3| unnamed protein product [Vitis vinifera]              150   1e-34
emb|CAN76690.1| hypothetical protein VITISV_001363 [Vitis vinifera]   143   1e-32
ref|XP_003528081.1| PREDICTED: uncharacterized protein LOC100782...   120   9e-26
ref|XP_003522459.1| PREDICTED: tetratricopeptide repeat protein ...   116   2e-24

>ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein 27 homolog [Vitis
           vinifera]
          Length = 909

 Score =  150 bits (379), Expect = 1e-34
 Identities = 79/145 (54%), Positives = 105/145 (72%)
 Frame = -3

Query: 437 YAYARVDQAGQHFNIAEEASALQLSVTGILGFRTVDQVDARAQKVLVANTIIPSIGGLCP 258
           Y Y RVD +  +F  AE AS LQLS+TG+LGFRTV QV+ +AQ VLVANT + + G  CP
Sbjct: 281 YTYGRVDSSRLNFESAEVASGLQLSLTGVLGFRTVHQVEPKAQLVLVANTSMLNSGDTCP 340

Query: 257 TRSAELRSFSSKLGEAKMGSHSHEIHEASDILLTPKLLENEDPGMGANGTKTAPTTSVHL 78
           + S EL + +S +GE    +H +   EASD+L+TP+LL+N++PG+GA GT+   T +V L
Sbjct: 341 STSPELPTNASIIGENNSLAHQNGKGEASDVLMTPRLLQNDNPGIGAQGTQNDGTAAVPL 400

Query: 77  LPIQQAVILARCLIIEKNTRSDEMQ 3
             IQQ VILA+CL+IEK+TR DEMQ
Sbjct: 401 NAIQQGVILAQCLLIEKSTRHDEMQ 425


>emb|CBI27694.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  150 bits (379), Expect = 1e-34
 Identities = 79/145 (54%), Positives = 105/145 (72%)
 Frame = -3

Query: 437 YAYARVDQAGQHFNIAEEASALQLSVTGILGFRTVDQVDARAQKVLVANTIIPSIGGLCP 258
           Y Y RVD +  +F  AE AS LQLS+TG+LGFRTV QV+ +AQ VLVANT + + G  CP
Sbjct: 281 YTYGRVDSSRLNFESAEVASGLQLSLTGVLGFRTVHQVEPKAQLVLVANTSMLNSGDTCP 340

Query: 257 TRSAELRSFSSKLGEAKMGSHSHEIHEASDILLTPKLLENEDPGMGANGTKTAPTTSVHL 78
           + S EL + +S +GE    +H +   EASD+L+TP+LL+N++PG+GA GT+   T +V L
Sbjct: 341 STSPELPTNASIIGENNSLAHQNGKGEASDVLMTPRLLQNDNPGIGAQGTQNDGTAAVPL 400

Query: 77  LPIQQAVILARCLIIEKNTRSDEMQ 3
             IQQ VILA+CL+IEK+TR DEMQ
Sbjct: 401 NAIQQGVILAQCLLIEKSTRHDEMQ 425


>emb|CAN76690.1| hypothetical protein VITISV_001363 [Vitis vinifera]
          Length = 438

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/145 (53%), Positives = 101/145 (69%)
 Frame = -3

Query: 437 YAYARVDQAGQHFNIAEEASALQLSVTGILGFRTVDQVDARAQKVLVANTIIPSIGGLCP 258
           Y Y RVD +  +F  AE AS LQLS TG+LGFRTV QV+ +AQ VLVANT + + G  CP
Sbjct: 281 YTYGRVDSSRLNFESAEVASGLQLSXTGVLGFRTVHQVEPKAQLVLVANTSMLNSGDTCP 340

Query: 257 TRSAELRSFSSKLGEAKMGSHSHEIHEASDILLTPKLLENEDPGMGANGTKTAPTTSVHL 78
           + S EL + +S +GE     H +   EASD+L+TP+LL+N++P +GA G +   T +V L
Sbjct: 341 STSPELPTNASIIGENNSLXHQNGKGEASDVLMTPRLLQNDNPEIGAQGIQNDGTAAVPL 400

Query: 77  LPIQQAVILARCLIIEKNTRSDEMQ 3
             IQQ VILA+CL+IEK+TR DEMQ
Sbjct: 401 NAIQQGVILAQCLLIEKSTRHDEMQ 425


>ref|XP_003528081.1| PREDICTED: uncharacterized protein LOC100782837 [Glycine max]
          Length = 813

 Score =  120 bits (302), Expect = 9e-26
 Identities = 68/145 (46%), Positives = 85/145 (58%)
 Frame = -3

Query: 437 YAYARVDQAGQHFNIAEEASALQLSVTGILGFRTVDQVDARAQKVLVANTIIPSIGGLCP 258
           Y Y RVD    HF  AE A+ LQLSVTG LGFRTV Q + +AQ VLV NT   ++   CP
Sbjct: 265 YLYGRVDSCRMHFESAEMAAGLQLSVTGALGFRTVHQAEPKAQMVLVTNTSTSNVDN-CP 323

Query: 257 TRSAELRSFSSKLGEAKMGSHSHEIHEASDILLTPKLLENEDPGMGANGTKTAPTTSVHL 78
                +++  S  GE     +  E  EASDIL  PKLLEN+D    + G +     +  L
Sbjct: 324 LTGTGMQTCDSNNGEDNWNLNQRETSEASDILRIPKLLENDDSKTRSQGMENGAHVTPSL 383

Query: 77  LPIQQAVILARCLIIEKNTRSDEMQ 3
              QQAVILA CL+IEK++R DE+Q
Sbjct: 384 TATQQAVILAYCLLIEKSSRHDELQ 408


>ref|XP_003522459.1| PREDICTED: tetratricopeptide repeat protein 27 homolog [Glycine
           max]
          Length = 910

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/145 (45%), Positives = 85/145 (58%)
 Frame = -3

Query: 437 YAYARVDQAGQHFNIAEEASALQLSVTGILGFRTVDQVDARAQKVLVANTIIPSIGGLCP 258
           Y Y RVD    HF  AE A+ LQLSVTG+LGFRTV Q + +AQ VLV NT   ++   C 
Sbjct: 267 YLYGRVDSCRMHFESAEMAAGLQLSVTGVLGFRTVHQAEPKAQMVLVTNTSTSNVDN-CS 325

Query: 257 TRSAELRSFSSKLGEAKMGSHSHEIHEASDILLTPKLLENEDPGMGANGTKTAPTTSVHL 78
              + +++  S  GE     +  E  EASDIL  PKLL+N D    + G +     +  L
Sbjct: 326 LTGSGMQTSDSNNGEDNWNLNQCETSEASDILRIPKLLDNNDSKTWSQGMENGAHVTPSL 385

Query: 77  LPIQQAVILARCLIIEKNTRSDEMQ 3
              QQAVILA CL+IEK++R DE+Q
Sbjct: 386 TATQQAVILAYCLLIEKSSRHDELQ 410


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