BLASTX nr result

ID: Coptis21_contig00014001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014001
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269907.1| PREDICTED: rac-like GTP-binding protein 7 [V...   326   5e-87
ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
gb|ABK21895.1| unknown [Picea sitchensis] gi|294462678|gb|ADE768...   321   1e-85
ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|2...   321   2e-85
gb|ADE75718.1| unknown [Picea sitchensis] gi|294462091|gb|ADE765...   319   5e-85

>ref|XP_002269907.1| PREDICTED: rac-like GTP-binding protein 7 [Vitis vinifera]
           gi|297734644|emb|CBI16695.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  326 bits (835), Expect = 5e-87
 Identities = 163/198 (82%), Positives = 176/198 (88%), Gaps = 2/198 (1%)
 Frame = +3

Query: 51  MST--SKFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGL 224
           MST  S+FIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+  G+ I+LGL
Sbjct: 1   MSTVPSRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLADGQTINLGL 60

Query: 225 WDTAGQEDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGT 404
           WDTAGQEDYNRLRPLSYRGADVF+LAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFLLAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGT 120

Query: 405 KLDLRDDKQFYLDHPGARTISTAQGEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVL 584
           KLDLR+DKQF++D+PGA TIST QGEELKKQIGALAYIECSSKTQQNVK VFDAAIKVVL
Sbjct: 121 KLDLREDKQFHMDYPGACTISTEQGEELKKQIGALAYIECSSKTQQNVKAVFDAAIKVVL 180

Query: 585 HXXXXXXXXXXXXLCYIL 638
                         C++L
Sbjct: 181 QPPKLSKRKRKKRACHVL 198


>ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|222835162|gb|EEE73597.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  323 bits (827), Expect = 4e-86
 Identities = 158/195 (81%), Positives = 175/195 (89%)
 Frame = +3

Query: 54  STSKFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDT 233
           +T+KFIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+V G+ ++LGLWDT
Sbjct: 1   TTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNLGLWDT 60

Query: 234 AGQEDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLD 413
           AGQEDYNRLRPLSYRGADVFILAFSLISRPS+EN+SKKWVPELRHYAPSVPIVLVGTKLD
Sbjct: 61  AGQEDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVLVGTKLD 120

Query: 414 LRDDKQFYLDHPGARTISTAQGEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHXX 593
           LR+D+QF LD+PGA TIST QG EL+KQIGALAY+ECSSKTQQNVK VFDAAIKVVL   
Sbjct: 121 LREDRQFLLDYPGACTISTEQGLELQKQIGALAYVECSSKTQQNVKAVFDAAIKVVLQPP 180

Query: 594 XXXXXXXXXXLCYIL 638
                     +C+IL
Sbjct: 181 KRKKHKRKHRVCHIL 195


>gb|ABK21895.1| unknown [Picea sitchensis] gi|294462678|gb|ADE76884.1| unknown
           [Picea sitchensis]
          Length = 196

 Score =  321 bits (823), Expect = 1e-85
 Identities = 155/196 (79%), Positives = 173/196 (88%)
 Frame = +3

Query: 51  MSTSKFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWD 230
           MST++FIKCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSA+V+V G  ++LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 231 TAGQEDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKL 410
           TAGQEDYNRLRPLSYRGADVF+LAFSLIS+ S+ENISKKW+PELRHYAPSVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPSVPIILVGTKL 120

Query: 411 DLRDDKQFYLDHPGARTISTAQGEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHX 590
           DLR+DKQF+ DHPGA  ISTAQGE+LK+QIGA AYIECSSKTQQNVK VFDAAIKVVL  
Sbjct: 121 DLREDKQFFADHPGAAPISTAQGEDLKRQIGAAAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 591 XXXXXXXXXXXLCYIL 638
                       C+IL
Sbjct: 181 PRQKKRRKKQRTCFIL 196


>ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|223534156|gb|EEF35872.1|
           rac gtpase, putative [Ricinus communis]
          Length = 202

 Score =  321 bits (822), Expect = 2e-85
 Identities = 158/195 (81%), Positives = 173/195 (88%)
 Frame = +3

Query: 54  STSKFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDT 233
           +T+KFIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+VMV G+ ++LGLWDT
Sbjct: 8   TTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVMVDGKTVNLGLWDT 67

Query: 234 AGQEDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLD 413
           AGQEDYNRLRPLSYRGADVFILAFSLISRPS+ENISKKWVPELRHYAPSVPI+LVGTKLD
Sbjct: 68  AGQEDYNRLRPLSYRGADVFILAFSLISRPSYENISKKWVPELRHYAPSVPIILVGTKLD 127

Query: 414 LRDDKQFYLDHPGARTISTAQGEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHXX 593
           LR+D QF+LD+PGA TIS  QG ELKKQIGALAY+ECSSKTQQNVK VFDAAIK VL   
Sbjct: 128 LREDGQFHLDYPGACTISREQGIELKKQIGALAYVECSSKTQQNVKAVFDAAIKAVLQPP 187

Query: 594 XXXXXXXXXXLCYIL 638
                     +C+IL
Sbjct: 188 KTKKQKRKQRVCHIL 202


>gb|ADE75718.1| unknown [Picea sitchensis] gi|294462091|gb|ADE76598.1| unknown
           [Picea sitchensis]
          Length = 196

 Score =  319 bits (818), Expect = 5e-85
 Identities = 153/178 (85%), Positives = 168/178 (94%)
 Frame = +3

Query: 51  MSTSKFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWD 230
           MSTS+FIKCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSA+V+V G  ++LGLWD
Sbjct: 1   MSTSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 231 TAGQEDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKL 410
           TAGQEDYNRLRPLSYRGADVF+LAFSLIS+ S+ENISKKW+PELRHYAP+VPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPNVPIILVGTKL 120

Query: 411 DLRDDKQFYLDHPGARTISTAQGEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVL 584
           DLRDDKQF+ DHPGA  I+T QGEELKKQIGA AYIECSSKTQQNVK VFDAAIKVVL
Sbjct: 121 DLRDDKQFFADHPGAAPITTPQGEELKKQIGAAAYIECSSKTQQNVKAVFDAAIKVVL 178


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