BLASTX nr result

ID: Coptis21_contig00013493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013493
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]    57   2e-06
ref|XP_002268266.2| PREDICTED: putative disease resistance prote...    56   3e-06
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...    55   6e-06
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...    55   6e-06

>emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]
          Length = 541

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
 Frame = -3

Query: 236 VLDEWNTRILI-----SANGSHVTNRVCSYLLSLCACFKHVGVRHDIAHRIKGIREGLDV 72
           VLDEW+T IL      + N S  TN+V S + S C CFK V  R DIA +IK +++ LDV
Sbjct: 79  VLDEWSTAILQLQMEGAENASMSTNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDV 138

Query: 71  IALRKGQLGLVQSHSHE 21
           I   + +   + S + E
Sbjct: 139 IGSERTRFNFISSGTQE 155


>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 932

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
 Frame = -3

Query: 236 VLDEWNTRILI-----SANGSHVTNRVCSYLLSLCACFKHVGVRHDIAHRIKGIREGLDV 72
           VLDEW+T IL      + N S   N+V S + S C CFK V  R DIA +IK +++ LDV
Sbjct: 79  VLDEWSTAILQLQMEGAENASMSKNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDV 138

Query: 71  IALRKGQLGLVQSHSHE 21
           IA  + +   + S + E
Sbjct: 139 IASERTRFNFISSGTQE 155


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
 Frame = -3

Query: 236 VLDEWNTRILI----SANGSHVTNRVCSYLLSLCACFKHVGVRHDIAHRIKGIREGLDVI 69
           V+DEW+T IL      A  + ++ +V S + S C C K V  R DIA ++K I++ LDVI
Sbjct: 79  VVDEWSTAILQLQIKGAESASMSKKVSSCIPSPCFCLKQVASRRDIALKVKSIKQQLDVI 138

Query: 68  ALRKGQLGLVQSHSHE 21
           A ++ Q   + S S E
Sbjct: 139 ASQRSQFNFISSLSEE 154


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
 Frame = -3

Query: 236 VLDEWNTRILI-----SANGSHVTNRVCSYLLSLCACFKHVGVRHDIAHRIKGIREGLDV 72
           V+DEW+T IL      + + S    +V S + S C C K V  R DIA +IKGI++ LDV
Sbjct: 79  VVDEWSTAILQLQIKGAESASMSKKKVSSCIPSPCFCLKQVASRRDIALKIKGIKQQLDV 138

Query: 71  IALRKGQLGLVQSHSHE 21
           IA ++ Q   + S S E
Sbjct: 139 IASQRSQFNFISSLSEE 155


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