BLASTX nr result

ID: Coptis21_contig00013479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013479
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517028.1| conserved hypothetical protein [Ricinus comm...   198   3e-49
ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine ...   193   1e-47
ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like ...   193   1e-47
ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
emb|CBI26352.3| unnamed protein product [Vitis vinifera]              191   5e-47

>ref|XP_002517028.1| conserved hypothetical protein [Ricinus communis]
           gi|223543663|gb|EEF45191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score =  198 bits (504), Expect = 3e-49
 Identities = 93/114 (81%), Positives = 106/114 (92%)
 Frame = +1

Query: 7   PTIVEVSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL 186
           PTIVEVSNS+TC+LLKSISG+KVEPVENV SKLFVQCSRQKGLIKIYRHLLNYRKNVFNL
Sbjct: 289 PTIVEVSNSNTCDLLKSISGVKVEPVENVVSKLFVQCSRQKGLIKIYRHLLNYRKNVFNL 348

Query: 187 CGFPHLEGLKYKTIRLGFKEAVVCGLYRSGKIDFHPNDEEVLEQTDKVLFIAPV 348
           C FP+L G+KY+ +R GF+E VVCGLYR+GKI FHP+D+E+L+QTDKVLFI PV
Sbjct: 349 CSFPNLAGIKYRKLRRGFQEVVVCGLYRNGKIYFHPSDDEILQQTDKVLFIGPV 402


>ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine max]
          Length = 850

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/113 (83%), Positives = 103/113 (91%)
 Frame = +1

Query: 1   AIPTIVEVSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF 180
           ++PTIVEVS+S TCELLKSIS LKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF
Sbjct: 409 SVPTIVEVSSSKTCELLKSISALKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF 468

Query: 181 NLCGFPHLEGLKYKTIRLGFKEAVVCGLYRSGKIDFHPNDEEVLEQTDKVLFI 339
           NLC  P+LEG+ Y+ IR  F+EAVVCGLYRSGKI FHPND E+L+QTDKVLFI
Sbjct: 469 NLCSLPNLEGMTYRQIRHRFQEAVVCGLYRSGKIYFHPNDGEILQQTDKVLFI 521


>ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like [Glycine max]
          Length = 788

 Score =  193 bits (490), Expect = 1e-47
 Identities = 95/113 (84%), Positives = 102/113 (90%)
 Frame = +1

Query: 1   AIPTIVEVSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF 180
           ++PTIVEVS+S TCELLKSIS LKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF
Sbjct: 347 SVPTIVEVSSSKTCELLKSISALKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF 406

Query: 181 NLCGFPHLEGLKYKTIRLGFKEAVVCGLYRSGKIDFHPNDEEVLEQTDKVLFI 339
           NLC  P+LEGL Y+ IR  F EAVVCGLYRSGKI FHPND E+L+QTDKVLFI
Sbjct: 407 NLCSLPNLEGLTYRQIRHRFPEAVVCGLYRSGKIYFHPNDGEILQQTDKVLFI 459


>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  192 bits (489), Expect = 2e-47
 Identities = 91/116 (78%), Positives = 106/116 (91%)
 Frame = +1

Query: 1   AIPTIVEVSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF 180
           A+PTIV  SN++TCELLKS+SG+KVEPVENVASKLFVQCSRQKGLIKIY+HLLNYRKNVF
Sbjct: 299 AVPTIV--SNTNTCELLKSVSGVKVEPVENVASKLFVQCSRQKGLIKIYKHLLNYRKNVF 356

Query: 181 NLCGFPHLEGLKYKTIRLGFKEAVVCGLYRSGKIDFHPNDEEVLEQTDKVLFIAPV 348
           NLC FP L G+KY+ +R GF+E VVCGLYR+GKI FHPND+E+L+QTDK+LFI PV
Sbjct: 357 NLCSFPVLAGIKYRQLRRGFQEVVVCGLYRNGKIYFHPNDDEILQQTDKILFIGPV 412


>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/116 (79%), Positives = 104/116 (89%)
 Frame = +1

Query: 1   AIPTIVEVSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVF 180
           ++PTIVEV+NS T ELLKSISGLKVEPVENVASKL VQCSRQKGLIKIY+HLLNYRKNVF
Sbjct: 403 SVPTIVEVTNSQTAELLKSISGLKVEPVENVASKLLVQCSRQKGLIKIYKHLLNYRKNVF 462

Query: 181 NLCGFPHLEGLKYKTIRLGFKEAVVCGLYRSGKIDFHPNDEEVLEQTDKVLFIAPV 348
           NL  FP+L G+KY+ +R GF+ AVVCGLYR+GKI FHPND+EVL QTDKVLF+ PV
Sbjct: 463 NLFSFPNLAGIKYRQLRRGFEGAVVCGLYRNGKIYFHPNDDEVLRQTDKVLFVGPV 518


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