BLASTX nr result

ID: Coptis21_contig00013456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013456
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002980805.1| hypothetical protein SELMODRAFT_50400 [Selag...    83   2e-20
ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264...    87   2e-15
emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera]    87   2e-15
ref|XP_003611589.1| Condensin-2 complex subunit G2 [Medicago tru...    84   3e-14
ref|XP_004168196.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    83   4e-14

>ref|XP_002980805.1| hypothetical protein SELMODRAFT_50400 [Selaginella moellendorffii]
           gi|300151344|gb|EFJ17990.1| hypothetical protein
           SELMODRAFT_50400 [Selaginella moellendorffii]
          Length = 677

 Score = 83.2 bits (204), Expect(2) = 2e-20
 Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
 Frame = -3

Query: 512 LKMDQGRRFVAFLFRLSGQLVKEALALIRSQIPFGRKSMLEAYADILFRAWK--VGEXXX 339
           L+  +GRRF++FLF L+ QLVKE  AL+ SQIPFGRKS+LEAY DIL+RAWK   GE   
Sbjct: 131 LRSAEGRRFISFLFGLNPQLVKELNALMHSQIPFGRKSILEAYGDILYRAWKGAAGEILV 190

Query: 338 XXXXXXXXXXXRVYMVEGAVYARSETLT 255
                         +VEGA+YA S+TL+
Sbjct: 191 EIEKSCLQ-----VLVEGAIYAASKTLS 213



 Score = 41.6 bits (96), Expect(2) = 2e-20
 Identities = 19/38 (50%), Positives = 29/38 (76%)
 Frame = -2

Query: 255 LAASIRRILGRFVNQ*TTDGVEKLLFRLTEPVIFRSLQ 142
           L+++ R++L  F++Q    GVE +LFRL EP++FRSLQ
Sbjct: 212 LSSACRKVLEGFISQRAEAGVEGMLFRLQEPLLFRSLQ 249


>ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264215 [Vitis vinifera]
          Length = 1295

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 50/90 (55%), Positives = 60/90 (66%)
 Frame = -3

Query: 527 TPLINLKMDQGRRFVAFLFRLSGQLVKEALALIRSQIPFGRKSMLEAYADILFRAWKVGE 348
           TPL  LK + GR+FVAF+F LS QLVKEALA+IRSQIPFGRKSMLE Y DI+F+AWK  E
Sbjct: 227 TPLY-LKTEDGRKFVAFMFGLSRQLVKEALAMIRSQIPFGRKSMLETYGDIVFQAWKHVE 285

Query: 347 XXXXXXXXXXXXXXRVYMVEGAVYARSETL 258
                            ++EGA++A S  L
Sbjct: 286 GESRNEIENGFLQG---LIEGAIHANSGAL 312



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 14/90 (15%)
 Frame = -2

Query: 369 SGLESWGRVV---------QAREEIENGFLQG-----IYG*GGSLCKV*NLNLAASIRRI 232
           S LE++G +V         ++R EIENGFLQG     I+   G+L        AASIRR+
Sbjct: 268 SMLETYGDIVFQAWKHVEGESRNEIENGFLQGLIEGAIHANSGAL--------AASIRRV 319

Query: 231 LGRFVNQ*TTDGVEKLLFRLTEPVIFRSLQ 142
           LG F+NQ TT+GVEKLLFRLTEPVIFRSLQ
Sbjct: 320 LGGFINQRTTNGVEKLLFRLTEPVIFRSLQ 349


>emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera]
          Length = 1268

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 50/90 (55%), Positives = 60/90 (66%)
 Frame = -3

Query: 527 TPLINLKMDQGRRFVAFLFRLSGQLVKEALALIRSQIPFGRKSMLEAYADILFRAWKVGE 348
           TPL  LK + GR+FVAF+F LS QLVKEALA+IRSQIPFGRKSMLE Y DI+F+AWK  E
Sbjct: 227 TPLY-LKTEDGRKFVAFMFGLSRQLVKEALAMIRSQIPFGRKSMLETYGDIVFQAWKHVE 285

Query: 347 XXXXXXXXXXXXXXRVYMVEGAVYARSETL 258
                            ++EGA++A S  L
Sbjct: 286 GESRNEIENGFLQG---LIEGAIHANSGAL 312



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 14/90 (15%)
 Frame = -2

Query: 369 SGLESWGRVV---------QAREEIENGFLQG-----IYG*GGSLCKV*NLNLAASIRRI 232
           S LE++G +V         ++R EIENGFLQG     I+   G+L        AASIRR+
Sbjct: 268 SMLETYGDIVFQAWKHVEGESRNEIENGFLQGLIEGAIHANSGAL--------AASIRRV 319

Query: 231 LGRFVNQ*TTDGVEKLLFRLTEPVIFRSLQ 142
           LG F+NQ TT+GVEKLLFRLTEPVIFRSLQ
Sbjct: 320 LGGFINQRTTNGVEKLLFRLTEPVIFRSLQ 349


>ref|XP_003611589.1| Condensin-2 complex subunit G2 [Medicago truncatula]
           gi|355512924|gb|AES94547.1| Condensin-2 complex subunit
           G2 [Medicago truncatula]
          Length = 1327

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = -3

Query: 512 LKMDQGRRFVAFLFRLSGQLVKEALALIRSQIPFGRKSMLEAYADILFRAWK 357
           LK + GR+F+AFLF LS QL KE LA+IRSQIPFGRKSMLEAY DILFRAWK
Sbjct: 235 LKTEDGRKFLAFLFGLSDQLGKELLAMIRSQIPFGRKSMLEAYGDILFRAWK 286



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
 Frame = -2

Query: 369 SGLESWGRVV---------QAREEIENGFLQGIYG*GGSLCKV*NLNLAASIRRILGRFV 217
           S LE++G ++          +R  IE+GFLQ +    GS+     +  A  IRR+LG F+
Sbjct: 272 SMLEAYGDILFRAWKAAPEDSRSGIEDGFLQDLIE--GSIHASSGV-FALYIRRVLGGFI 328

Query: 216 NQ*TTDGVEKLLFRLTEPVIFRSLQ 142
           NQ T DGVEKLL+RL EPVIFRSLQ
Sbjct: 329 NQRTVDGVEKLLYRLAEPVIFRSLQ 353


>ref|XP_004168196.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101225636 [Cucumis sativus]
          Length = 1217

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 45/82 (54%), Positives = 55/82 (67%)
 Frame = -3

Query: 512 LKMDQGRRFVAFLFRLSGQLVKEALALIRSQIPFGRKSMLEAYADILFRAWKVGEXXXXX 333
           LK + GRRFVA+   LS QL+KEALA+IRSQIPFGRKSMLEAY DI+FRAW+  E     
Sbjct: 251 LKTEDGRRFVAYTLGLSRQLLKEALAVIRSQIPFGRKSMLEAYGDIVFRAWRNSEENTRD 310

Query: 332 XXXXXXXXXRVYMVEGAVYARS 267
                       +VEG ++AR+
Sbjct: 311 EIENGFLQG---LVEGVIHART 329



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 46/85 (54%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
 Frame = -2

Query: 369 SGLESWGRVV---------QAREEIENGFLQGIYG*GGSLCKV*NLNLAASIRRILGRFV 217
           S LE++G +V           R+EIENGFLQG+      +         ASIRR+LG F+
Sbjct: 288 SMLEAYGDIVFRAWRNSEENTRDEIENGFLQGLVE---GVIHARTSAFGASIRRVLGGFM 344

Query: 216 NQ*TTDGVEKLLFRLTEPVIFRSLQ 142
           NQ T DGVEKLLFRLTEPVIFRSLQ
Sbjct: 345 NQRTVDGVEKLLFRLTEPVIFRSLQ 369


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