BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013453
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...    67   2e-09
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...    61   8e-08
ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...    57   2e-06
ref|XP_002324365.1| glutamate-gated kainate-type ion channel rec...    57   2e-06

>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 784

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = -2

Query: 504  NNECADSDKDKD-NQSLSVSNFWGLFLVTALTSTIMLVLYILHLFRKFGRHSVRPIGTTS 328
            + EC+ S  D D  +SLS+ NFWG++++T  TSTI L+L++  L + +        G  +
Sbjct: 645  SRECSSSATDNDITESLSLQNFWGIYIITGATSTICLLLFLFRLLKNYHHQQDEDRGNAT 704

Query: 327  GIDASLWSRIKALRTYFSNNQRLNMSDKDLNSDEARDDVVVLFSSNNGELISAYNTPGHP 148
              D S+W +   L  Y  + + +      ++   A    V  ++S+  E  S  +TP + 
Sbjct: 705  PSDKSVWGKTVTLARYIYHGETVIPGGSPIS---APSPDVYEWNSSRREFSSPEDTPENL 761

Query: 147  QATPVTEIEM 118
            Q +P  EIE+
Sbjct: 762  QPSPPAEIEV 771


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 931

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/144 (24%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
 Frame = -2

Query: 510  SSNNECADSDKDKDN-QSLSVSNFWGLFLVTALTSTIMLVLYILHLFRKFGRHSVRPIGT 334
            + + +C  +  D D  +SLS+ +FWG++++T  TSTI  +L++ HL + + +  V   G 
Sbjct: 788  AQSRQCFSNATDNDKTESLSLQSFWGIYIITGATSTICFLLFLFHLLKNYHKQEVEDRGN 847

Query: 333  TSGIDASLWSRIKALRTYFSNNQRLNMSDKDLNSDEARDDVVVLFSSNNGELISAYNTPG 154
             +  D S+W +   L  Y  + + +   +  + +       +  ++S+N EL +  +T  
Sbjct: 848  ATPSDKSVWEKTVTLARYIYHGETVTPGESPIPNPSPD---IHEWNSSNLELSNPEDTQE 904

Query: 153  HPQATPVTEIE---MPETYTGESN 91
            +  ++   EIE   +P++ T +S+
Sbjct: 905  NLLSSSPAEIEVVNIPDSDTQKSS 928


>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 843

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/47 (44%), Positives = 36/47 (76%)
 Frame = -2

Query: 504 NNECADSDKDKDNQSLSVSNFWGLFLVTALTSTIMLVLYILHLFRKF 364
           +++CA +  D  N+SLS+ NFWGL+L++  TSTI  +L+++HL +K+
Sbjct: 731 SSQCASNANDNRNESLSLQNFWGLYLISGATSTICFLLFLIHLLKKY 777


>ref|XP_002324365.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865799|gb|EEF02930.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 901

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/83 (33%), Positives = 50/83 (60%)
 Frame = -2

Query: 510  SSNNECADSDKDKDNQSLSVSNFWGLFLVTALTSTIMLVLYILHLFRKFGRHSVRPIGTT 331
            ++   C DS     + SLS+++FWGLFL+  + + + L+++I+    + GR ++RP  +T
Sbjct: 820  ANQTSCPDSGTSVSSNSLSINSFWGLFLIAGIAALLALIIFIVMFVHQEGRVALRPSDST 879

Query: 330  SGIDASLWSRIKALRTYFSNNQR 262
            +    S+WS+I+ L   F  NQR
Sbjct: 880  T----SIWSKIRHLFIIF--NQR 896