BLASTX nr result
ID: Coptis21_contig00013452
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013452 (1686 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm... 99 4e-18 ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 93 2e-16 ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi... 92 3e-16 ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578... 90 2e-15 ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 89 3e-15 >ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis] gi|223525141|gb|EEF27869.1| conserved hypothetical protein [Ricinus communis] Length = 383 Score = 98.6 bits (244), Expect = 4e-18 Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 20/210 (9%) Frame = -2 Query: 1685 GFGFDPVSKVFKVVRI--VINLRNASREE------TAAEVYNLGTDEWRSLGKVPFYFPR 1530 GFGFDPV K +KV+++ + N + E + ++ +G+ WRSLG+ P+Y Sbjct: 152 GFGFDPVRKKYKVLKVSYIRRTNNTAGERYGLSLRSEVQILTVGSPSWRSLGETPYY--- 208 Query: 1529 YTNDNYWSPIRNNTGSDILVNGALHWIGSSSNSMTSEEVILFKLDIEEFQKLPLPPGLGS 1350 PI ++ S + VNG LHW+ ++I F L+ E+F+++PLP G Sbjct: 209 --------PI--HSPSQVYVNGRLHWVNWPVRYRPGRKLISFDLEDEKFREVPLPGSDGI 258 Query: 1349 AVNTNRFLVELGECLCVVHVINAEYIRIWVMKDYGFESSWTKEYVIRITQRVVIPGSRDY 1170 + LV + +CL N +WVMKDYG + SW KE+ I V +P + Sbjct: 259 KWG-DYMLVVIRDCLSAAVYRNYGSFEVWVMKDYGLKESWIKEFSI----GVYLPKGLEQ 313 Query: 1169 RLDP------------LQPIQLMKNGEMLL 1116 ++DP + + ++KNGE+LL Sbjct: 314 KIDPSFRVSKFYRRAFTRILCVLKNGEILL 343 >ref|XP_002320506.1| f-box family protein [Populus trichocarpa] gi|222861279|gb|EEE98821.1| f-box family protein [Populus trichocarpa] Length = 422 Score = 93.2 bits (230), Expect = 2e-16 Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 18/229 (7%) Frame = -2 Query: 1685 GFGFDPVSKVFKVVRIVI---------NLRNASREETAAEVYNLGTDEWRSLGKVPFYFP 1533 GFGF+P +K +KV+RIV R + ++ LG EWRSLGKV + Sbjct: 170 GFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLV 229 Query: 1532 RYTNDNYWSPIRNNTGSDILVNGALHWIGSSSNSMTSEEVILFKLDIEEFQKLPLPPGLG 1353 R S LVNG LHWI + + ++ F L E+F+++ P G Sbjct: 230 R-------------RASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVS-KPDCG 275 Query: 1352 SAVNTNRFLVELGECLCVVHVINAEYIRIWVMKDYGFESSWTKEYVIRITQRVVIPGSRD 1173 N LV L CL N + IWVMK+Y + SW KEY I + ++D Sbjct: 276 GLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQD 335 Query: 1172 YRLD---------PLQPIQLMKNGEMLLLCSDSLNGYLAYYNTKTKTFR 1053 +L + + ++KNGE+LL + N L Y+ K F+ Sbjct: 336 RQLKIWKNSSNGRVVGALCVLKNGEILL---EYKNRVLVSYDPKNGKFK 381 >ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera] gi|147785390|emb|CAN68678.1| hypothetical protein VITISV_041941 [Vitis vinifera] Length = 409 Score = 92.4 bits (228), Expect = 3e-16 Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 20/210 (9%) Frame = -2 Query: 1685 GFGFDPVSKVFKVVRIVI---------NLRNASREETAAEVYNLGTDEWRSLGKVPFYFP 1533 GFG+ P+++V+KVV++V R + ++ +V LG+ WRSLGKV + Sbjct: 170 GFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLD 229 Query: 1532 RYTNDNYWSPIRNNTGSDILVNGALHWIGSSSNSMTSEEVILFKLDIEEFQKLPLPPGLG 1353 R+ S+ LVNG LHW+ +T ++ F L E+F+++P P G Sbjct: 230 RWP-------------SEALVNGRLHWVTRPRRYVT-RFIVSFDLADEQFREIP-KPDCG 274 Query: 1352 SAVNTNRFLVELGECL-CVVHVINAEYIRIWVMKDYGFESSWTKEYVI------RITQRV 1194 N L+ LG CL VH N + + +WVMK+Y + SW KE+ I + Q V Sbjct: 275 GLSRCNYHLLVLGGCLSAAVHRSNGK-LEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDV 333 Query: 1193 VIPGSRDYRLDP----LQPIQLMKNGEMLL 1116 P R +R P ++ + L+KNGE+LL Sbjct: 334 NRP-HRIWRNAPKGRGVRLLCLLKNGEILL 362 >ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21 unknown protein [Arabidopsis thaliana] gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21 [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1| At3g07870 [Arabidopsis thaliana] gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis thaliana] Length = 417 Score = 89.7 bits (221), Expect = 2e-15 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 19/206 (9%) Frame = -2 Query: 1685 GFGFDPVSKVFKVVRIVINLRNASR-------------EETAAEVYNLG---TDE---WR 1563 GFGF ++K +KV++IV ++S +++ ++ L TD+ WR Sbjct: 166 GFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWR 225 Query: 1562 SLGKVPFYFPRYTNDNYWSPIRNNTGSDILVNGALHWIGSSSNSMTSEEVILFKLDIEEF 1383 SLGK P+ F + + S+ LVNG LH++ + + + F L+ EEF Sbjct: 226 SLGKAPYKFVKRS-------------SEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEF 272 Query: 1382 QKLPLPPGLGSAVNTNRFLVELGECLCVVHVINAEYIRIWVMKDYGFESSWTKEYVIRIT 1203 +++P P G TN LV L CLC V N + IWVMK YG + SW KEY I Sbjct: 273 KEIP-KPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSI--- 328 Query: 1202 QRVVIPGSRDYRLDPLQPIQLMKNGE 1125 +P LD +P+ + KN E Sbjct: 329 -GTYLPKGLKQNLD--RPMWIWKNAE 351 >ref|XP_002301588.1| f-box family protein [Populus trichocarpa] gi|222843314|gb|EEE80861.1| f-box family protein [Populus trichocarpa] Length = 408 Score = 89.4 bits (220), Expect = 3e-15 Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 18/229 (7%) Frame = -2 Query: 1685 GFGFDPVSKVFKVVRIVINLRNASREETA---------AEVYNLGTDEWRSLGKVPFYFP 1533 GFGF+P + +KV+RIV R + ++ LG WRSLGKV + Sbjct: 169 GFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLV 228 Query: 1532 RYTNDNYWSPIRNNTGSDILVNGALHWIGSSSNSMTSEEVILFKLDIEEFQKLPLPPGLG 1353 R S+ LVNG LHW+ + + ++ F L E+F+++P P G Sbjct: 229 R-------------RASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVP-KPDCG 274 Query: 1352 SAVNTNRFLVELGECLCVVHVINAEYIRIWVMKDYGFESSWTKEYVI------RITQRVV 1191 + L L CL V N + IWVMK+Y + SW KEY I + Q +V Sbjct: 275 GLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLV 334 Query: 1190 IP---GSRDYRLDPLQPIQLMKNGEMLLLCSDSLNGYLAYYNTKTKTFR 1053 P ++ + ++KNGE+LL + N L Y+ K F+ Sbjct: 335 RPLKIWKNASNGRAVRALCVLKNGEILL---EYKNRALVSYDPKKGKFK 380