BLASTX nr result

ID: Coptis21_contig00013426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013426
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15262.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ...    90   2e-16
ref|XP_003617649.1| Nuclear ribonuclease Z [Medicago truncatula]...    89   5e-16
gb|AFK49299.1| unknown [Medicago truncatula]                           86   3e-15
ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glyc...    84   9e-15

>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = +2

Query: 2   GHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 166
           GHTHLSEIV +ADR  NKAILLIHFSARY  DEI+ AVSALPP L GRVFALTEG
Sbjct: 275 GHTHLSEIVSYADRFQNKAILLIHFSARYTTDEIQEAVSALPPPLGGRVFALTEG 329


>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
          Length = 290

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = +2

Query: 2   GHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 166
           GHTHLSEIV +ADR  NKAILLIHFSARY  DEI+ AVSALPP L GRVFALTEG
Sbjct: 235 GHTHLSEIVSYADRFQNKAILLIHFSARYTTDEIQEAVSALPPPLGGRVFALTEG 289


>ref|XP_003617649.1| Nuclear ribonuclease Z [Medicago truncatula]
           gi|355518984|gb|AET00608.1| Nuclear ribonuclease Z
           [Medicago truncatula]
          Length = 412

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = +2

Query: 2   GHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 166
           GHTHLSEI+ +AD+L NKAILLIHFSARY  +EI+ AVSALPP LAGR FALTEG
Sbjct: 357 GHTHLSEIISYADKLQNKAILLIHFSARYTVEEIQQAVSALPPPLAGRTFALTEG 411


>gb|AFK49299.1| unknown [Medicago truncatula]
          Length = 335

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = +2

Query: 2   GHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 166
           GHTHL EI+ +ADRL NKAILLIHFSARY  +EI+ AV ALPP LAGR FALTEG
Sbjct: 280 GHTHLFEIISYADRLQNKAILLIHFSARYTVEEIQQAVGALPPPLAGRTFALTEG 334


>ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glycine max]
          Length = 279

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = +2

Query: 2   GHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAAVSALPPNLAGRVFALTEG 166
           GHTHLSEI+ +A+ L N+AILLIHFSARY  +EI+ AVSALPP+L+GR FALTEG
Sbjct: 224 GHTHLSEIISYAESLQNRAILLIHFSARYTVEEIQHAVSALPPSLSGRTFALTEG 278


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