BLASTX nr result

ID: Coptis21_contig00013402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013402
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276822.1| PREDICTED: uncharacterized protein LOC100264...   141   9e-52
emb|CAN80273.1| hypothetical protein VITISV_039443 [Vitis vinifera]   141   3e-51
ref|XP_002326296.1| predicted protein [Populus trichocarpa] gi|1...   145   4e-50
ref|XP_002516241.1| conserved hypothetical protein [Ricinus comm...   127   6e-47
gb|ACU19553.1| unknown [Glycine max]                                  130   2e-46

>ref|XP_002276822.1| PREDICTED: uncharacterized protein LOC100264520 [Vitis vinifera]
           gi|297738529|emb|CBI27774.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  141 bits (356), Expect(2) = 9e-52
 Identities = 93/205 (45%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
 Frame = +1

Query: 94  MLGKRTRPATVGKLPDPLMSSGRFGYPETITSPKCSLEFRILSPRTLKNSDPVAGVGLGI 273
           MLGK +RPA +GKL   L+S       +  TSP+  L+ +I SPR  KN D  +GVGLGI
Sbjct: 1   MLGKTSRPA-IGKLAGSLISGNCTAILDVATSPRSPLDMKIQSPRGQKNYDLFSGVGLGI 59

Query: 274 VAALEKSSS---DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCKQSHPQEVESRVECMES 441
           VAAL+KSS+   ++L K  V G+N+ RS P+P+         C +      E  ++ +E 
Sbjct: 60  VAALDKSSNCRGEILAKYAVSGTNMGRSGPVPVTSG----KNCGRLKVGFGELEMDSLED 115

Query: 442 YTYVTSHKHNKPT-TKTYCDKGVETGAGHDRNCREDMRSRNLAVFCESPPRTLEVKTAFP 618
           YTYVT HK NK + T+ Y D G ET A H                 ESP R      AFP
Sbjct: 116 YTYVTCHKPNKKSFTRVYFD-GHETTAFHKH---------------ESPARFSNDVQAFP 159

Query: 619 TLDFLSSCYLCRKKLHGIDIYMYRG 693
           T DFLSSC+LCRK LHG DIYMYRG
Sbjct: 160 TSDFLSSCHLCRKNLHGKDIYMYRG 184



 Score = 89.7 bits (221), Expect(2) = 9e-52
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = +2

Query: 743 IYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSSSPYTRDNLFFTGVI 907
           IYMYRGEKAFCS ECR RQI +DERKE+C SE SR+ADVSSSPYTR  +F TG++
Sbjct: 179 IYMYRGEKAFCSNECRSRQIVMDERKEQCRSEASRSADVSSSPYTRGQIFSTGIL 233


>emb|CAN80273.1| hypothetical protein VITISV_039443 [Vitis vinifera]
          Length = 235

 Score =  141 bits (355), Expect(2) = 3e-51
 Identities = 91/204 (44%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = +1

Query: 94  MLGKRTRPATVGKLPDPLMSSGRFGYPETITSPKCSLEFRILSPRTLKNSDPVAGVGLGI 273
           MLGK +RPA +GKL   L+S       +  TSP+  L+ +I SPR  KN D   GVGLGI
Sbjct: 1   MLGKTSRPA-IGKLAGSLISGNCTAILDVATSPRSPLDMKIQSPRGQKNYDLFXGVGLGI 59

Query: 274 VAALEKSSS---DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCKQSHPQEVESRVECMES 441
           VAAL+KSS+   ++L K  V G+NL RS P+P+         C +      E  ++ +E 
Sbjct: 60  VAALDKSSNCGGEILAKYAVSGTNLGRSGPVPVTSG----KNCGRLKVGFGELEMDSLED 115

Query: 442 YTYVTSHKHNKPTTKTYCDKGVETGAGHDRNCREDMRSRNLAVFCESPPRTLEVKTAFPT 621
           YTYVT HK NK +       G ET A H                 ESP R  +   AFPT
Sbjct: 116 YTYVTCHKPNKKSFTRVYFNGHETTAFHKH---------------ESPARFSDDMQAFPT 160

Query: 622 LDFLSSCYLCRKKLHGIDIYMYRG 693
            DFLSSC+LCRK LHG DIYMYRG
Sbjct: 161 SDFLSSCHLCRKNLHGKDIYMYRG 184



 Score = 88.2 bits (217), Expect(2) = 3e-51
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +2

Query: 743 IYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSSSPYTRDNLFFTGVI 907
           IYMYRGEKAFCS ECR RQI +DERKE+C SE SR+ DVSSSPYTR  +F TG++
Sbjct: 179 IYMYRGEKAFCSNECRSRQIVMDERKEQCRSEASRSVDVSSSPYTRGQIFSTGIL 233


>ref|XP_002326296.1| predicted protein [Populus trichocarpa] gi|118481936|gb|ABK92901.1|
           unknown [Populus trichocarpa]
           gi|222833489|gb|EEE71966.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  145 bits (366), Expect(2) = 4e-50
 Identities = 93/206 (45%), Positives = 122/206 (59%), Gaps = 6/206 (2%)
 Frame = +1

Query: 94  MLGKRTRPATVGKLPDPLMSSGRFGYPETITSPKCSLEFRILSPRTLKNSDPVAGVGLGI 273
           MLGKRT P  +G+L + L+S  R  + +  TSP+  L++   SP+ LKN   + GVGLGI
Sbjct: 1   MLGKRTNPM-IGRLSELLVSGTRAKFMDANTSPRSPLDYMNQSPKGLKNYHDLGGVGLGI 59

Query: 274 VAALEKSSS-----DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCKQSHPQEVESRVECM 435
           VAAL+K S+     +VL K  V  SNL RSNPIP+N        C+  +    E  ++ +
Sbjct: 60  VAALDKPSNTDVGHEVLAKYAVCRSNLNRSNPIPVNSG----KDCEIFNCGFEEMDMKSL 115

Query: 436 ESYTYVTSHKHNKPTTKTYCDKGVETGAGHDRNCREDMRSRNLAVFCESPPRTLEVKTAF 615
           E YTYVT H  N+  TK Y D G     GHDR C E+M   ++      P R +E    +
Sbjct: 116 EDYTYVTIHAPNQSFTKVYYDGGEYGKQGHDRRC-ENMGCTSVPK--GFPARLVEDVPVY 172

Query: 616 PTLDFLSSCYLCRKKLHGIDIYMYRG 693
           PT DFLSSC+LCRKKL+G DIY+YRG
Sbjct: 173 PTSDFLSSCHLCRKKLYGRDIYIYRG 198



 Score = 80.5 bits (197), Expect(2) = 4e-50
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +2

Query: 743 IYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSSSPYTRDNLFFTGVI 907
           IY+YRGEKAFCS ECR  QI IDERKE+C SE++R+ADVSSSP+    +F TG++
Sbjct: 193 IYIYRGEKAFCSVECRSSQIMIDERKEQCRSEVARSADVSSSPFKTSPIFSTGIL 247


>ref|XP_002516241.1| conserved hypothetical protein [Ricinus communis]
           gi|223544727|gb|EEF46243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  127 bits (320), Expect(2) = 6e-47
 Identities = 93/221 (42%), Positives = 126/221 (57%), Gaps = 21/221 (9%)
 Frame = +1

Query: 94  MLGKRTRPATVGKLPDPLMSSGRF-GYPETIT--SPKCSLEFRILSPRTLKNSDPVAGVG 264
           MLGKRT P  +G+L + L+S  R  G+ +  T  SP+  L++RI SPR LKN D + GVG
Sbjct: 1   MLGKRTNPM-IGRLSELLVSGNRAAGFLDVATAPSPRSPLDYRIQSPRGLKNYD-LGGVG 58

Query: 265 LGIVAALEKS---SSD-------VLVKTMV---DGSNLRSNPIPINGSTKIYSKCKQSHP 405
           LGIVAALEKS   SSD       +L K  +     +  RS+PIP+     ++ +  +   
Sbjct: 59  LGIVAALEKSTYSSSDGTSSGHEILAKYAILCSSNNTTRSDPIPVKIGLSLHKEMLE--- 115

Query: 406 QEVESRVECMESYTYVTSH-KHNKPTTKTYCDKGVETGAGHDR---NCREDMRSRNLAVF 573
                 ++ ++ YTYVT+H   NK  TK Y D G +   GH R   +   D     ++V 
Sbjct: 116 ------IDSLDDYTYVTTHGPDNKSMTKVYYDHGQK---GHRRIGFDSTTDNSFGVVSVI 166

Query: 574 CESP-PRTLEVKTAFPTLDFLSSCYLCRKKLHGIDIYMYRG 693
            E+P P     + A+PT DFLSSC+LC+KKLHG DIYMYRG
Sbjct: 167 KETPAPARFVDEVAYPTSDFLSSCHLCKKKLHGKDIYMYRG 207



 Score = 87.4 bits (215), Expect(2) = 6e-47
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +2

Query: 743 IYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSSSPYTRDNLFFTGVI 907
           IYMYRGEKAFCSAECR RQI IDERKE+C SE+ R+ADVSSSPYT   +F  G++
Sbjct: 202 IYMYRGEKAFCSAECRSRQIMIDERKEQCRSEVQRSADVSSSPYTTSPIFSAGIL 256


>gb|ACU19553.1| unknown [Glycine max]
          Length = 238

 Score =  130 bits (328), Expect(2) = 2e-46
 Identities = 94/210 (44%), Positives = 123/210 (58%), Gaps = 10/210 (4%)
 Frame = +1

Query: 94  MLGKRTRPATVGKLPDPLMSSGR-FGYPETITSPKCSLEFRIL--SPRTLKNSDPVAGVG 264
           MLGKR RP  +GKL + L+S GR   Y +T  SP+  L+ +++  SPR LKN D + GVG
Sbjct: 1   MLGKRPRPM-IGKLSELLVSRGRTVAYLDTTGSPRGPLDMKMMQSSPRGLKNYD-LGGVG 58

Query: 265 LGIVAALEKSSS----DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCKQSHPQEVESRVE 429
           LGIV AL+KS+     +VL K  V  SNL RS PIP++     Y+K    +P E +    
Sbjct: 59  LGIVVALDKSNEVAAREVLPKHAVCTSNLNRSGPIPVH-----YTK----NPDEFD---- 105

Query: 430 CMESYTYVTSHKHNKPTTKTYCDKGVETGAGHDRNCREDMRSRNLAVFCESPPRTL--EV 603
            +E YTYVT H  NK  TK Y D G       +   R    + N+ V   + P+ L  E 
Sbjct: 106 -VEEYTYVTCHVPNKTFTKVYYDGG-------EGEIRRHYNNSNVGVLRRTAPQPLIVEA 157

Query: 604 KTAFPTLDFLSSCYLCRKKLHGIDIYMYRG 693
           ++ +PT +FLSSC+LC KKLHG DIYMYRG
Sbjct: 158 ESLYPTSNFLSSCHLCGKKLHGKDIYMYRG 187



 Score = 82.8 bits (203), Expect(2) = 2e-46
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +2

Query: 743 IYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSSSPYTRDNLFFTGVI 907
           IYMYRGEKAFCS ECR  QI +DERKE+C SE SR+ ++SSSPY R+ +F TG++
Sbjct: 182 IYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRSVEMSSSPYAREQIFSTGIL 236


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