BLASTX nr result

ID: Coptis21_contig00013378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013378
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34906.1| unknown [Medicago truncatula]                           59   7e-07
ref|XP_003605933.1| NEDD8-activating enzyme E1 regulatory subuni...    59   7e-07
ref|XP_003605932.1| NEDD8-activating enzyme E1 regulatory subuni...    59   7e-07
ref|XP_002267415.1| PREDICTED: NEDD8-activating enzyme E1 regula...    58   2e-06
ref|XP_002320462.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>gb|AFK34906.1| unknown [Medicago truncatula]
          Length = 523

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 686 RKLTVCRYRPIEEELNSPVLSELQKYLTDEDY 591
           RKL VCRYRPIE+E NSP LSELQKYLTDED+
Sbjct: 376 RKLKVCRYRPIEDEFNSPNLSELQKYLTDEDH 407


>ref|XP_003605933.1| NEDD8-activating enzyme E1 regulatory subunit [Medicago truncatula]
           gi|355506988|gb|AES88130.1| NEDD8-activating enzyme E1
           regulatory subunit [Medicago truncatula]
           gi|388514749|gb|AFK45436.1| unknown [Medicago
           truncatula]
          Length = 539

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 686 RKLTVCRYRPIEEELNSPVLSELQKYLTDEDY 591
           RKL VCRYRPIE+E NSP LSELQKYLTDED+
Sbjct: 376 RKLKVCRYRPIEDEFNSPNLSELQKYLTDEDH 407


>ref|XP_003605932.1| NEDD8-activating enzyme E1 regulatory subunit [Medicago truncatula]
           gi|355506987|gb|AES88129.1| NEDD8-activating enzyme E1
           regulatory subunit [Medicago truncatula]
          Length = 531

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 686 RKLTVCRYRPIEEELNSPVLSELQKYLTDEDY 591
           RKL VCRYRPIE+E NSP LSELQKYLTDED+
Sbjct: 384 RKLKVCRYRPIEDEFNSPNLSELQKYLTDEDH 415


>ref|XP_002267415.1| PREDICTED: NEDD8-activating enzyme E1 regulatory subunit [Vitis
           vinifera] gi|297739147|emb|CBI28798.3| unnamed protein
           product [Vitis vinifera]
          Length = 523

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 686 RKLTVCRYRPIEEELNSPVLSELQKYLTDEDY 591
           RKLTVCRYR +EEE NSP+  ELQKYLTDEDY
Sbjct: 376 RKLTVCRYRLLEEEFNSPIQPELQKYLTDEDY 407


>ref|XP_002320462.1| predicted protein [Populus trichocarpa] gi|222861235|gb|EEE98777.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/32 (71%), Positives = 29/32 (90%)
 Frame = -3

Query: 686 RKLTVCRYRPIEEELNSPVLSELQKYLTDEDY 591
           RKL +CRYRPIE+E N+P ++ELQKYLTDE+Y
Sbjct: 374 RKLKICRYRPIEDEFNNPAVTELQKYLTDEEY 405


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