BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013369
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chlorop...   387   e-105
ref|XP_002511913.1| 50S ribosomal protein L5, putative [Ricinus ...   352   1e-94
gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]           348   2e-93
ref|NP_192040.1| 50S ribosomal protein L5 [Arabidopsis thaliana]...   347   4e-93
ref|XP_002872896.1| ribosomal protein L5 family protein [Arabido...   345   8e-93

>ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera]
            gi|297745362|emb|CBI40442.3| unnamed protein product
            [Vitis vinifera]
          Length = 265

 Score =  387 bits (995), Expect = e-105
 Identities = 193/246 (78%), Positives = 216/246 (87%), Gaps = 1/246 (0%)
 Frame = -2

Query: 1037 MASSATLHSCFSSFHSQSPILSSPISTRFPTPSSRNQCGFSVKA-SNIVLVEKSEAEKVQ 861
            MAS A L S  SSFH Q P+ SSP S R P  + RN CGFSVKA S IVLVEKSEA K  
Sbjct: 1    MASPALLQSNASSFHGQFPLASSPFSVRLPYGNPRNGCGFSVKALSEIVLVEKSEAVKTN 60

Query: 860  RLKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICG 681
            RLKTTYLEKIVPLLKEEF+Y NMH+VPK+EKIV+NCGIG+A+QN+KGL+AAM +L++I G
Sbjct: 61   RLKTTYLEKIVPLLKEEFSYQNMHEVPKIEKIVLNCGIGDASQNAKGLEAAMNELALIAG 120

Query: 680  QRPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPNSF 501
            QRPVKTRAR SIATFKLREGQP+G+AVTLRGN+MYSFLDRLINLGLPRTRDFQGV+PNSF
Sbjct: 121  QRPVKTRARASIATFKLREGQPVGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 180

Query: 500  DGHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEGGS 321
            DGHGNYSIGM++Q VFPEIR+D LG+ RGMDVCITTTAKTDKEGQ+LLALMGMPF+EGG 
Sbjct: 181  DGHGNYSIGMKDQSVFPEIRFDILGRARGMDVCITTTAKTDKEGQQLLALMGMPFREGGG 240

Query: 320  QTVVVR 303
             TVV R
Sbjct: 241  STVVQR 246


>ref|XP_002511913.1| 50S ribosomal protein L5, putative [Ricinus communis]
            gi|223549093|gb|EEF50582.1| 50S ribosomal protein L5,
            putative [Ricinus communis]
          Length = 265

 Score =  352 bits (902), Expect = 1e-94
 Identities = 183/265 (69%), Positives = 215/265 (81%), Gaps = 3/265 (1%)
 Frame = -2

Query: 1037 MASSATLHS-CFSSFHSQSPILSSPISTRFPTPSSRNQCGF-SVKASN-IVLVEKSEAEK 867
            M+S + L S   +SF  Q PI+SS  S + P  + RN  G  SV+A+  IVLVEKSEAEK
Sbjct: 1    MSSPSLLQSSAAASFRGQFPIISSHPSVKVPYGNPRNGNGVVSVRATGEIVLVEKSEAEK 60

Query: 866  VQRLKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSII 687
              RLKTTYL+KIVPLL EEF+Y+N+HQVPK+EK+VVNCGIGEAAQN+KGL+AAM DL++I
Sbjct: 61   TYRLKTTYLQKIVPLLMEEFSYSNIHQVPKIEKVVVNCGIGEAAQNAKGLEAAMNDLALI 120

Query: 686  CGQRPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPN 507
             GQRP+KTRAR SIATFK+REGQP+G+AVTLRGN+MYSFLDRLINLGLPRTRDFQGVS N
Sbjct: 121  TGQRPIKTRARNSIATFKIREGQPLGIAVTLRGNVMYSFLDRLINLGLPRTRDFQGVSQN 180

Query: 506  SFDGHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEG 327
            SFDGHGNYSIG+R+Q VFPEIR+DALGK +GMDVCITTTAK D+EGQ+LLALMGMPF+E 
Sbjct: 181  SFDGHGNYSIGIRDQSVFPEIRFDALGKAKGMDVCITTTAKNDQEGQKLLALMGMPFRES 240

Query: 326  GSQTVVVRXXXXXXXXXXXXXKGRR 252
               TV+ R             +GRR
Sbjct: 241  SGTTVLQRKKKLKKHHFDSKSRGRR 265


>gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]
          Length = 221

 Score =  348 bits (892), Expect = 2e-93
 Identities = 170/201 (84%), Positives = 189/201 (94%)
 Frame = -2

Query: 905 SNIVLVEKSEAEKVQRLKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNS 726
           S I+LVE++E+EK+ RLKTTYL+KIVPLLKEEF+YTN+HQVPKVEKIVVNCGIG+AAQN+
Sbjct: 2   SGIILVEETESEKLNRLKTTYLQKIVPLLKEEFSYTNIHQVPKVEKIVVNCGIGDAAQNA 61

Query: 725 KGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLG 546
           KGLDAAM DL+ I GQRPVKTRA+ +IATFKLREGQPIGLAVTLRGN+MYSFLDRLINLG
Sbjct: 62  KGLDAAMGDLANITGQRPVKTRAKKAIATFKLREGQPIGLAVTLRGNVMYSFLDRLINLG 121

Query: 545 LPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQ 366
           LPRTRDFQGV+ NSFDGHGN+SIG +EQGVFPEIRYDALGKPRGMDVCITTTAKTDKEG 
Sbjct: 122 LPRTRDFQGVNSNSFDGHGNFSIGFKEQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGY 181

Query: 365 RLLALMGMPFKEGGSQTVVVR 303
           RLLALMGMPF+EGG  + VVR
Sbjct: 182 RLLALMGMPFREGGGPSTVVR 202


>ref|NP_192040.1| 50S ribosomal protein L5 [Arabidopsis thaliana]
            gi|50400725|sp|O04603.1|RK5_ARATH RecName: Full=50S
            ribosomal protein L5, chloroplastic; Flags: Precursor
            gi|2191128|gb|AAB61015.1| belongs to the L5P family of
            ribosomal proteins [Arabidopsis thaliana]
            gi|7267628|emb|CAB80940.1| putative L5 ribosomal protein
            [Arabidopsis thaliana] gi|15810311|gb|AAL07043.1|
            putative L5 ribosomal protein [Arabidopsis thaliana]
            gi|21281101|gb|AAM45056.1| putative L5 ribosomal protein
            [Arabidopsis thaliana] gi|21592367|gb|AAM64318.1|
            putative L5 ribosomal protein [Arabidopsis thaliana]
            gi|332656607|gb|AEE82007.1| 50S ribosomal protein L5
            [Arabidopsis thaliana]
          Length = 262

 Score =  347 bits (889), Expect = 4e-93
 Identities = 171/238 (71%), Positives = 204/238 (85%)
 Frame = -2

Query: 1037 MASSATLHSCFSSFHSQSPILSSPISTRFPTPSSRNQCGFSVKASNIVLVEKSEAEKVQR 858
            MAS + L S  SSFH +   L++P S R  +P  RN     V AS  VLVEKSEAEK QR
Sbjct: 1    MASPSLLQSSASSFHGRFSPLAAPSSARMLSPPLRNVV--KVSASGTVLVEKSEAEKTQR 58

Query: 857  LKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQ 678
            LKT YLE+I+P LKEEF Y N+HQVPKV+KIVVNCGIG+AAQN KGL+AAMKD+++I GQ
Sbjct: 59   LKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQ 118

Query: 677  RPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPNSFD 498
            +P+KTRAR SIATFK+RE QP+G+AVTLRG++MYSFLDRLINL LPRTRDFQGVSP+SFD
Sbjct: 119  KPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFD 178

Query: 497  GHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEGG 324
            G+GNYSIG+++QGVFPEIR+DA+GK RGMDVCI+TTAK+D+EGQ+LLALMGMPF+EGG
Sbjct: 179  GNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFREGG 236


>ref|XP_002872896.1| ribosomal protein L5 family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297318733|gb|EFH49155.1| ribosomal protein L5
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score =  345 bits (886), Expect = 8e-93
 Identities = 170/238 (71%), Positives = 203/238 (85%)
 Frame = -2

Query: 1037 MASSATLHSCFSSFHSQSPILSSPISTRFPTPSSRNQCGFSVKASNIVLVEKSEAEKVQR 858
            MAS + L S  SSFH +   L++P S R  +P  RN     V AS  VLVEKSEAEK  R
Sbjct: 1    MASPSLLQSSASSFHGRFSPLAAPSSARMRSPPLRNLV--KVSASGTVLVEKSEAEKTHR 58

Query: 857  LKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQ 678
            LKT YLE+I+P LK+EF Y N+HQVPKV+KIVVNCGIG+AAQN KGL+AAMKD+++I GQ
Sbjct: 59   LKTAYLERIIPALKDEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQ 118

Query: 677  RPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPNSFD 498
            +P+KTRAR SIATFK+RE QP+G+AVTLRG++MYSFLDRLINL LPRTRDFQGVSP+SFD
Sbjct: 119  KPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFD 178

Query: 497  GHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEGG 324
            G+GNYSIG+++QGVFPEIR+DA+GK RGMDVCI+TTAKTD+EGQ+LLALMGMPF+EGG
Sbjct: 179  GNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKTDQEGQKLLALMGMPFREGG 236