BLASTX nr result
ID: Coptis21_contig00013369
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013369 (1056 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chlorop... 387 e-105 ref|XP_002511913.1| 50S ribosomal protein L5, putative [Ricinus ... 352 1e-94 gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis] 348 2e-93 ref|NP_192040.1| 50S ribosomal protein L5 [Arabidopsis thaliana]... 347 4e-93 ref|XP_002872896.1| ribosomal protein L5 family protein [Arabido... 345 8e-93 >ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera] gi|297745362|emb|CBI40442.3| unnamed protein product [Vitis vinifera] Length = 265 Score = 387 bits (995), Expect = e-105 Identities = 193/246 (78%), Positives = 216/246 (87%), Gaps = 1/246 (0%) Frame = -2 Query: 1037 MASSATLHSCFSSFHSQSPILSSPISTRFPTPSSRNQCGFSVKA-SNIVLVEKSEAEKVQ 861 MAS A L S SSFH Q P+ SSP S R P + RN CGFSVKA S IVLVEKSEA K Sbjct: 1 MASPALLQSNASSFHGQFPLASSPFSVRLPYGNPRNGCGFSVKALSEIVLVEKSEAVKTN 60 Query: 860 RLKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICG 681 RLKTTYLEKIVPLLKEEF+Y NMH+VPK+EKIV+NCGIG+A+QN+KGL+AAM +L++I G Sbjct: 61 RLKTTYLEKIVPLLKEEFSYQNMHEVPKIEKIVLNCGIGDASQNAKGLEAAMNELALIAG 120 Query: 680 QRPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPNSF 501 QRPVKTRAR SIATFKLREGQP+G+AVTLRGN+MYSFLDRLINLGLPRTRDFQGV+PNSF Sbjct: 121 QRPVKTRARASIATFKLREGQPVGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 180 Query: 500 DGHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEGGS 321 DGHGNYSIGM++Q VFPEIR+D LG+ RGMDVCITTTAKTDKEGQ+LLALMGMPF+EGG Sbjct: 181 DGHGNYSIGMKDQSVFPEIRFDILGRARGMDVCITTTAKTDKEGQQLLALMGMPFREGGG 240 Query: 320 QTVVVR 303 TVV R Sbjct: 241 STVVQR 246 >ref|XP_002511913.1| 50S ribosomal protein L5, putative [Ricinus communis] gi|223549093|gb|EEF50582.1| 50S ribosomal protein L5, putative [Ricinus communis] Length = 265 Score = 352 bits (902), Expect = 1e-94 Identities = 183/265 (69%), Positives = 215/265 (81%), Gaps = 3/265 (1%) Frame = -2 Query: 1037 MASSATLHS-CFSSFHSQSPILSSPISTRFPTPSSRNQCGF-SVKASN-IVLVEKSEAEK 867 M+S + L S +SF Q PI+SS S + P + RN G SV+A+ IVLVEKSEAEK Sbjct: 1 MSSPSLLQSSAAASFRGQFPIISSHPSVKVPYGNPRNGNGVVSVRATGEIVLVEKSEAEK 60 Query: 866 VQRLKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSII 687 RLKTTYL+KIVPLL EEF+Y+N+HQVPK+EK+VVNCGIGEAAQN+KGL+AAM DL++I Sbjct: 61 TYRLKTTYLQKIVPLLMEEFSYSNIHQVPKIEKVVVNCGIGEAAQNAKGLEAAMNDLALI 120 Query: 686 CGQRPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPN 507 GQRP+KTRAR SIATFK+REGQP+G+AVTLRGN+MYSFLDRLINLGLPRTRDFQGVS N Sbjct: 121 TGQRPIKTRARNSIATFKIREGQPLGIAVTLRGNVMYSFLDRLINLGLPRTRDFQGVSQN 180 Query: 506 SFDGHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEG 327 SFDGHGNYSIG+R+Q VFPEIR+DALGK +GMDVCITTTAK D+EGQ+LLALMGMPF+E Sbjct: 181 SFDGHGNYSIGIRDQSVFPEIRFDALGKAKGMDVCITTTAKNDQEGQKLLALMGMPFRES 240 Query: 326 GSQTVVVRXXXXXXXXXXXXXKGRR 252 TV+ R +GRR Sbjct: 241 SGTTVLQRKKKLKKHHFDSKSRGRR 265 >gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis] Length = 221 Score = 348 bits (892), Expect = 2e-93 Identities = 170/201 (84%), Positives = 189/201 (94%) Frame = -2 Query: 905 SNIVLVEKSEAEKVQRLKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNS 726 S I+LVE++E+EK+ RLKTTYL+KIVPLLKEEF+YTN+HQVPKVEKIVVNCGIG+AAQN+ Sbjct: 2 SGIILVEETESEKLNRLKTTYLQKIVPLLKEEFSYTNIHQVPKVEKIVVNCGIGDAAQNA 61 Query: 725 KGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLG 546 KGLDAAM DL+ I GQRPVKTRA+ +IATFKLREGQPIGLAVTLRGN+MYSFLDRLINLG Sbjct: 62 KGLDAAMGDLANITGQRPVKTRAKKAIATFKLREGQPIGLAVTLRGNVMYSFLDRLINLG 121 Query: 545 LPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQ 366 LPRTRDFQGV+ NSFDGHGN+SIG +EQGVFPEIRYDALGKPRGMDVCITTTAKTDKEG Sbjct: 122 LPRTRDFQGVNSNSFDGHGNFSIGFKEQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGY 181 Query: 365 RLLALMGMPFKEGGSQTVVVR 303 RLLALMGMPF+EGG + VVR Sbjct: 182 RLLALMGMPFREGGGPSTVVR 202 >ref|NP_192040.1| 50S ribosomal protein L5 [Arabidopsis thaliana] gi|50400725|sp|O04603.1|RK5_ARATH RecName: Full=50S ribosomal protein L5, chloroplastic; Flags: Precursor gi|2191128|gb|AAB61015.1| belongs to the L5P family of ribosomal proteins [Arabidopsis thaliana] gi|7267628|emb|CAB80940.1| putative L5 ribosomal protein [Arabidopsis thaliana] gi|15810311|gb|AAL07043.1| putative L5 ribosomal protein [Arabidopsis thaliana] gi|21281101|gb|AAM45056.1| putative L5 ribosomal protein [Arabidopsis thaliana] gi|21592367|gb|AAM64318.1| putative L5 ribosomal protein [Arabidopsis thaliana] gi|332656607|gb|AEE82007.1| 50S ribosomal protein L5 [Arabidopsis thaliana] Length = 262 Score = 347 bits (889), Expect = 4e-93 Identities = 171/238 (71%), Positives = 204/238 (85%) Frame = -2 Query: 1037 MASSATLHSCFSSFHSQSPILSSPISTRFPTPSSRNQCGFSVKASNIVLVEKSEAEKVQR 858 MAS + L S SSFH + L++P S R +P RN V AS VLVEKSEAEK QR Sbjct: 1 MASPSLLQSSASSFHGRFSPLAAPSSARMLSPPLRNVV--KVSASGTVLVEKSEAEKTQR 58 Query: 857 LKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQ 678 LKT YLE+I+P LKEEF Y N+HQVPKV+KIVVNCGIG+AAQN KGL+AAMKD+++I GQ Sbjct: 59 LKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQ 118 Query: 677 RPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPNSFD 498 +P+KTRAR SIATFK+RE QP+G+AVTLRG++MYSFLDRLINL LPRTRDFQGVSP+SFD Sbjct: 119 KPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFD 178 Query: 497 GHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEGG 324 G+GNYSIG+++QGVFPEIR+DA+GK RGMDVCI+TTAK+D+EGQ+LLALMGMPF+EGG Sbjct: 179 GNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFREGG 236 >ref|XP_002872896.1| ribosomal protein L5 family protein [Arabidopsis lyrata subsp. lyrata] gi|297318733|gb|EFH49155.1| ribosomal protein L5 family protein [Arabidopsis lyrata subsp. lyrata] Length = 264 Score = 345 bits (886), Expect = 8e-93 Identities = 170/238 (71%), Positives = 203/238 (85%) Frame = -2 Query: 1037 MASSATLHSCFSSFHSQSPILSSPISTRFPTPSSRNQCGFSVKASNIVLVEKSEAEKVQR 858 MAS + L S SSFH + L++P S R +P RN V AS VLVEKSEAEK R Sbjct: 1 MASPSLLQSSASSFHGRFSPLAAPSSARMRSPPLRNLV--KVSASGTVLVEKSEAEKTHR 58 Query: 857 LKTTYLEKIVPLLKEEFAYTNMHQVPKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQ 678 LKT YLE+I+P LK+EF Y N+HQVPKV+KIVVNCGIG+AAQN KGL+AAMKD+++I GQ Sbjct: 59 LKTAYLERIIPALKDEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQ 118 Query: 677 RPVKTRARVSIATFKLREGQPIGLAVTLRGNIMYSFLDRLINLGLPRTRDFQGVSPNSFD 498 +P+KTRAR SIATFK+RE QP+G+AVTLRG++MYSFLDRLINL LPRTRDFQGVSP+SFD Sbjct: 119 KPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFD 178 Query: 497 GHGNYSIGMREQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGQRLLALMGMPFKEGG 324 G+GNYSIG+++QGVFPEIR+DA+GK RGMDVCI+TTAKTD+EGQ+LLALMGMPF+EGG Sbjct: 179 GNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKTDQEGQKLLALMGMPFREGG 236