BLASTX nr result

ID: Coptis21_contig00013363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013363
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...   183   1e-44
emb|CBI20154.3| unnamed protein product [Vitis vinifera]              183   2e-44
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...   182   2e-44
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...   182   2e-44
ref|XP_002283521.1| PREDICTED: probable LRR receptor-like serine...   175   4e-42

>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/169 (52%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
 Frame = -2

Query: 529 LRNCSITGPIPPYIGERMLDIDTLDLSFNRLTGVIPETLDRLSNLRFMFLTNNTLTGKIS 350
           LRNC ITG IP YIGE M  +  LDLSFNRLTG IP++L  L  + +MFLTNN+LTG+I 
Sbjct: 291 LRNCRITGSIPIYIGE-MTVLKQLDLSFNRLTGSIPDSLQSLEAIDYMFLTNNSLTGEIP 349

Query: 349 PWIKDTRYNFDISYNNFNGTFQSSCQANKLNAISSFPAQPANSVPWCLKKDLPCPGKSKY 170
            WI  T  N+D+SYNNF GT  +SCQ  ++N +SS  +  ++   WCL+KDL C G  ++
Sbjct: 350 SWILRTSKNYDLSYNNFTGTVSTSCQQPEVNLVSSQLSSASSETAWCLRKDLTCSGDPEH 409

Query: 169 YNLFVNCGGSRFFFEGEQYEPDLDRMGPSSFF-FTDKWACSTTGDYRNN 26
           ++LF+NCGG +  FE  +YE DL R  PSSF   +++WA S+TG Y NN
Sbjct: 410 HSLFINCGGPKLTFENNEYEEDLTRGSPSSFISVSERWAYSSTGAYMNN 458


>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  183 bits (464), Expect = 2e-44
 Identities = 90/170 (52%), Positives = 117/170 (68%), Gaps = 2/170 (1%)
 Frame = -2

Query: 529 LRNCSITGPIPPYIGERMLDIDTLDLSFNRLTGVIPETLDRLSNLRFMFLTNNTLTGKIS 350
           LRNCSIT  IP YIG +M  + TLDLSFNRL+G + +T   LS L ++FLTNN+L+G + 
Sbjct: 451 LRNCSITDSIPDYIG-KMASLKTLDLSFNRLSGQVSDTWS-LSQLEYLFLTNNSLSGTLP 508

Query: 349 PWIKDTRYNFDISYNNFNGTFQSS-CQANKLNAISSFPAQPANSVPWCLKKDLPCPGKSK 173
            WI D+   FD+SYNNF G    + CQ   +N +SSF +  +NSV WCLKK LPCPG +K
Sbjct: 509 SWISDSNQKFDVSYNNFTGPSSLTVCQQRAVNLVSSFSSSDSNSVLWCLKKGLPCPGNAK 568

Query: 172 YYNLFVNCGGSRFFFEGEQYEPDLDRMGPSSFF-FTDKWACSTTGDYRNN 26
           +Y+LF+NCGGS   +EG  YE DLD  G S F  +++KW  S+TG + NN
Sbjct: 569 HYSLFINCGGSEINYEGNDYERDLDGSGASHFSDYSEKWGYSSTGVFTNN 618


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/166 (53%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
 Frame = -2

Query: 529 LRNCSITGPIPPYIGERMLDIDTLDLSFNRLTGVIPETLDRLSNLR--FMFLTNNTLTGK 356
           LRNC I G IP YIGE M  + TLDLSFN L G IPET   L   +  FMFLTNN+L+G+
Sbjct: 249 LRNCLINGSIPEYIGE-MNKLSTLDLSFNHLNGDIPETFQNLMKRKIDFMFLTNNSLSGE 307

Query: 355 ISPWIKDTRYNFDISYNNFNGTFQSSCQANKLNAISSFPAQPANSVPWCLKKDLPCPGKS 176
           +  WI  ++ N D+SYNNF+G+  +SCQ + +N I+S+P    + VPWCLKKDLPC GK+
Sbjct: 308 VPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPATNHQVPWCLKKDLPCSGKA 367

Query: 175 KYYNLFVNCGGSRFFFEGEQYEPDLDRMGPSSFF-FTDKWACSTTG 41
           +Y++LF+NCGG+R   +G  YE DL   G S+FF  ++KWA S+TG
Sbjct: 368 EYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTG 413


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Cucumis sativus]
          Length = 1030

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/166 (53%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
 Frame = -2

Query: 529 LRNCSITGPIPPYIGERMLDIDTLDLSFNRLTGVIPETLDRLSNLR--FMFLTNNTLTGK 356
           LRNC I G IP YIGE M  + TLDLSFN L G IPET   L   +  FMFLTNN+L+G+
Sbjct: 286 LRNCLINGSIPEYIGE-MNKLSTLDLSFNHLNGDIPETFQNLMKRKIDFMFLTNNSLSGE 344

Query: 355 ISPWIKDTRYNFDISYNNFNGTFQSSCQANKLNAISSFPAQPANSVPWCLKKDLPCPGKS 176
           +  WI  ++ N D+SYNNF+G+  +SCQ + +N I+S+P    + VPWCLKKDLPC GK+
Sbjct: 345 VPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPATNHQVPWCLKKDLPCSGKA 404

Query: 175 KYYNLFVNCGGSRFFFEGEQYEPDLDRMGPSSFF-FTDKWACSTTG 41
           +Y++LF+NCGG+R   +G  YE DL   G S+FF  ++KWA S+TG
Sbjct: 405 EYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTG 450


>ref|XP_002283521.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Vitis vinifera]
          Length = 1023

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/165 (49%), Positives = 117/165 (70%), Gaps = 2/165 (1%)
 Frame = -2

Query: 529 LRNCSITGPIPPYIGERMLDIDTLDLSFNRLTGVIPETLDRLSNLRFMFLTNNTLTGKIS 350
           LR+C ITG IPPY+GE M  +  LDLSFNRLTG IPE+L  L ++ +MFL +N L+G++ 
Sbjct: 288 LRDCLITGQIPPYLGE-MKKLKILDLSFNRLTGQIPESLQSLDSIDYMFLNDNLLSGEVP 346

Query: 349 PWIKDTRYNFDISYNNFNGTFQSSCQANKLNAISSFPAQPANSVPWCLKKDLPCPGKSKY 170
             I + + N D+SYNNF G+  S+CQ N ++ +SS+ +  +++V WCLKKDLPCP K +Y
Sbjct: 347 RGILNWKENVDLSYNNFTGSPPSTCQQNDVSFVSSYSSSKSSTVQWCLKKDLPCPEKPRY 406

Query: 169 YNLFVNCGGSRFFFEGEQYEPDLDRMGPSSFF--FTDKWACSTTG 41
           ++ F+NCGG +  FEG +Y+ D+D  G S F   + ++WA S+TG
Sbjct: 407 HSFFINCGGGKMSFEGNEYDKDVDGRGASHFLADYLERWAYSSTG 451


Top