BLASTX nr result

ID: Coptis21_contig00013349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013349
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                119   5e-25
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   103   3e-20
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    102   4e-20
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   102   7e-20
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   102   7e-20

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  119 bits (297), Expect = 5e-25
 Identities = 61/106 (57%), Positives = 73/106 (68%)
 Frame = +1

Query: 280  NTHNMKTRSKNGIIKPKTFYATKHALPLVLSTSLQNLPPTPTTFKQAVKDSNWRSAMATE 459
            NTH M TR+K GI KPK F ATKH LP  +  SL  LPPTP+TF QA K S+W  AM  E
Sbjct: 1110 NTHTMITRAKAGIHKPKVFTATKHQLPSTVD-SLTALPPTPSTFLQASKSSHWMEAMQFE 1168

Query: 460  FNALIKTKTWILVPPQDSQNVVEHKWVFRLKQKSDGSIDKFKARLV 597
            F AL  T TW LVP   + N+V  KWVF++K K DG+I+++KARLV
Sbjct: 1169 FQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLV 1214


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  103 bits (256), Expect = 3e-20
 Identities = 67/199 (33%), Positives = 92/199 (46%)
 Frame = +1

Query: 1    GRVFVSRHVVFNEFEFPYKXXXXXXXXXXXXXXXXXXXXXQKSHHSHYVHIDIPSSVHXX 180
            GR++V+RHVVF+E  FP++                          S   H   PS+    
Sbjct: 597  GRLYVTRHVVFHETVFPFQSTPDQSSSVVTIPTPAFLPCSSPPVSSLRSHTT-PSTSSPP 655

Query: 181  XXXXXXXXXXIPKTXXXXXXXXXXXXXXXTDSFNTHNMKTRSKNGIIKPKTFYATKHALP 360
                      +P                 T   N H M TR+KNGI K K ++++  +  
Sbjct: 656  LTNMPSSTISLPDLIQVPFADISTSEPHPT---NQHPMVTRAKNGISKKKVYFSSHIS-- 710

Query: 361  LVLSTSLQNLPPTPTTFKQAVKDSNWRSAMATEFNALIKTKTWILVPPQDSQNVVEHKWV 540
                         PTTF QAVKDSNW  AM  EF+AL +  TW LVPP  + N++  KWV
Sbjct: 711  ------------EPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWV 758

Query: 541  FRLKQKSDGSIDKFKARLV 597
            ++LK K DG++D++KARLV
Sbjct: 759  YKLKYKPDGTVDRYKARLV 777


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  102 bits (255), Expect = 4e-20
 Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
 Frame = +1

Query: 280  NTHNMKTRSKNGIIKPKTFYATKHALPLVLSTSLQNLPPT-PTTFKQAVKDSNWRSAMAT 456
            N H M+TR+KN I KPKT +         L+TSL +  PT PTT  QA+KD NWR+AM+ 
Sbjct: 888  NDHPMRTRAKNQITKPKTKFN--------LTTSLTSSKPTIPTTVAQALKDPNWRNAMSE 939

Query: 457  EFNALIKTKTWILVPPQDSQNVVEHKWVFRLKQKSDGSIDKFKARLV 597
            E NA +K  TW LV P+++++V+  KW+F LK   DGSI ++KARLV
Sbjct: 940  EINAQMKNHTWDLVSPEEAKHVISCKWIFTLKYNVDGSIARYKARLV 986


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  102 bits (253), Expect = 7e-20
 Identities = 56/106 (52%), Positives = 70/106 (66%)
 Frame = +1

Query: 280 NTHNMKTRSKNGIIKPKTFYATKHALPLVLSTSLQNLPPTPTTFKQAVKDSNWRSAMATE 459
           + H+M+TR+KN I KP      K  L + LS  L   P TPT   QA+KD  WR AM+ E
Sbjct: 623 SNHSMQTRAKNNIRKP----IQKLNLHIQLSKPLDLEPTTPT---QALKDPKWRKAMSEE 675

Query: 460 FNALIKTKTWILVPPQDSQNVVEHKWVFRLKQKSDGSIDKFKARLV 597
           ++AL++  TW LVP   SQNVV  KW+FR K+ SDGSID+FKARLV
Sbjct: 676 YDALVRNGTWELVPSNPSQNVVGCKWIFRTKRNSDGSIDRFKARLV 721


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/104 (49%), Positives = 67/104 (64%)
 Frame = +1

Query: 286  HNMKTRSKNGIIKPKTFYATKHALPLVLSTSLQNLPPTPTTFKQAVKDSNWRSAMATEFN 465
            H M TR+KN I KP          P   +T       TPT+  QA+KD NWR AM+ E++
Sbjct: 815  HRMTTRAKNNITKPIQKLNLHTHKPTFQTT-------TPTSISQALKDQNWRQAMSDEYD 867

Query: 466  ALIKTKTWILVPPQDSQNVVEHKWVFRLKQKSDGSIDKFKARLV 597
            AL++  TW LVPP+D  N+V  KW+FR+K+ SDGSID++KARLV
Sbjct: 868  ALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLV 911


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