BLASTX nr result

ID: Coptis21_contig00013345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013345
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304640.1| AP2/ERF domain-containing transcription fact...   103   5e-20
ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, puta...    86   6e-15
ref|XP_002297877.1| AP2/ERF domain-containing transcription fact...    86   1e-14
gb|ADJ67443.1| ethylene response factor 14 [Actinidia deliciosa]       83   5e-14
gb|ACO55953.1| RAP2-like protein [Juglans nigra]                       83   5e-14

>ref|XP_002304640.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222842072|gb|EEE79619.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 234

 Score =  103 bits (256), Expect = 5e-20
 Identities = 53/95 (55%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
 Frame = -3

Query: 741 YDEAALRFKGTKAKLNFPERVQGRSELSYYLGR-QDTNTVVERVPDSVIPQPP------- 586
           YD+AAL+FKGTKAKLNFPERVQGR+E  YY+G    TN + E+ P  V P PP       
Sbjct: 94  YDKAALKFKGTKAKLNFPERVQGRTEFGYYMGSGTSTNVLTEQSPRPVAPPPPPPPPPPS 153

Query: 585 -FSHDAYPGLLQYAQLLSSRDEDVQYVTPNFYNNQ 484
            F+ D YP LLQYAQ+LSS D +  Y T N +N Q
Sbjct: 154 SFAPDTYPDLLQYAQILSSNDANFPYYTSNLFNQQ 188


>ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
           gi|223548630|gb|EEF50121.1| AP2 domain transcription
           factor RAP2.3, putative [Ricinus communis]
          Length = 249

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 13/99 (13%)
 Frame = -3

Query: 741 YDEAALRFKGTKAKLNFPERVQGRSELSYYLGRQDTNT----------VVERVPDSVIPQ 592
           YD+AAL+FKGTKAKLNFPERVQG+ E SY++     ++          ++     S +P 
Sbjct: 96  YDKAALKFKGTKAKLNFPERVQGKPEFSYFMTTSGDSSSSISPGQNPMLMAPPASSYLPP 155

Query: 591 PP---FSHDAYPGLLQYAQLLSSRDEDVQYVTPNFYNNQ 484
           PP   F  + YP LLQYAQ+LSS D    Y T N +N Q
Sbjct: 156 PPPPSFPQETYPDLLQYAQILSSTDASFPYYTSNLFNQQ 194


>ref|XP_002297877.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222845135|gb|EEE82682.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 231

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
 Frame = -3

Query: 741 YDEAALRFKGTKAKLNFPERVQGRSELSYYLGR-QDTNTVVERVPDSVIPQPP----FSH 577
           YD+AAL+FKG+KAKLNFPERV    E  Y++     +N + E+ P  V P PP    F+ 
Sbjct: 94  YDKAALKFKGSKAKLNFPERVH---EFGYFMSSGASSNVMTEQNPRPVAPPPPPPSSFAP 150

Query: 576 DAYPGLLQYAQLLSSRDEDVQYVTPNFYNNQ 484
           D YP LLQYAQ+LSS D +  Y T N +N Q
Sbjct: 151 DTYPDLLQYAQILSSNDANFPYYTSNLFNQQ 181


>gb|ADJ67443.1| ethylene response factor 14 [Actinidia deliciosa]
          Length = 235

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 48/99 (48%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
 Frame = -3

Query: 741 YDEAALRFKGTKAKLNFPERVQGRSELSYYLGRQDTNTVVERVPDSVIPQPP-------- 586
           YDEAALRFKGTKAKLNFPE+VQ ++E +Y      T    +R+ +  +P PP        
Sbjct: 75  YDEAALRFKGTKAKLNFPEKVQAKTEYAYLTA--STTHGEDRISNPYVPPPPPAPPLPDS 132

Query: 585 -FSHDAYPGLLQYAQLLSSRDEDVQYVTPNFYNNQQQFV 472
             S + YP L QYAQLLSS D D  Y +   Y NQ  FV
Sbjct: 133 MSSQETYPDLFQYAQLLSSSDADFPYFSSALY-NQHPFV 170


>gb|ACO55953.1| RAP2-like protein [Juglans nigra]
          Length = 226

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
 Frame = -3

Query: 741 YDEAALRFKGTKAKLNFPERVQGRSELSYYLGRQDTNTVVERV----PDSVIPQPPFS-- 580
           YD AALRFKGTKAKLNFPERVQG SE  Y  G  +T+     V    P  V+  PP +  
Sbjct: 97  YDRAALRFKGTKAKLNFPERVQGTSEFGYPSGFGNTSVSQSAVPVQNPRPVVNPPPSTLP 156

Query: 579 -HDAYPGLLQYAQLLSSRDEDVQYVTPNFYNNQ 484
               +PGL QYAQLLSS D +  Y T + +N +
Sbjct: 157 QESTFPGLYQYAQLLSSSDVEFPYYTSSLFNQE 189


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