BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013344
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549536.1| PREDICTED: eukaryotic initiation factor iso-...    72   3e-14
ref|XP_003549535.1| PREDICTED: eukaryotic initiation factor iso-...    72   3e-14
ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit ...    66   2e-12
gb|ADO64264.1| eukaryotic initiation factor iso4G [Carica papaya]      63   1e-11
ref|XP_003610290.1| Eukaryotic initiation factor iso-4F subunit ...    61   2e-11

>ref|XP_003549536.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
           isoform 2 [Glycine max]
          Length = 792

 Score = 71.6 bits (174), Expect(2) = 3e-14
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -2

Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19
           P+ RSMPRGD+S MQ+  H  +PF +K + VNS+LL QG  G+I GR+S L+ G GA S 
Sbjct: 526 PKTRSMPRGDMSGMQTGGHSQSPFLSKTSTVNSRLLPQGSGGIISGRSSALVHGAGAPSA 585

Query: 18  GRPSN 4
            RP N
Sbjct: 586 ARPPN 590



 Score = 31.2 bits (69), Expect(2) = 3e-14
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 242 MPGMPGIDNNDNWEV 198
           MPGMPGID NDNWE+
Sbjct: 512 MPGMPGID-NDNWEM 525


>ref|XP_003549535.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
           isoform 1 [Glycine max]
          Length = 789

 Score = 71.6 bits (174), Expect(2) = 3e-14
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -2

Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19
           P+ RSMPRGD+S MQ+  H  +PF +K + VNS+LL QG  G+I GR+S L+ G GA S 
Sbjct: 523 PKTRSMPRGDMSGMQTGGHSQSPFLSKTSTVNSRLLPQGSGGIISGRSSALVHGAGAPSA 582

Query: 18  GRPSN 4
            RP N
Sbjct: 583 ARPPN 587



 Score = 31.2 bits (69), Expect(2) = 3e-14
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 242 MPGMPGIDNNDNWEV 198
           MPGMPGID NDNWE+
Sbjct: 509 MPGMPGID-NDNWEM 522


>ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit p82-34, putative
           [Ricinus communis] gi|223525907|gb|EEF28321.1|
           Eukaryotic initiation factor iso-4F subunit p82-34,
           putative [Ricinus communis]
          Length = 587

 Score = 65.9 bits (159), Expect(2) = 2e-12
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = -2

Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19
           PR RSMPRGD S MQ    V +P  NK ++VN++LL QG  G + G++S LLQG+G  SP
Sbjct: 318 PRTRSMPRGDGSTMQPTGRVPSPMFNKSSSVNTRLLPQGSGGFMSGKSSALLQGSGGPSP 377

Query: 18  GRPSN 4
            RP N
Sbjct: 378 -RPCN 381



 Score = 30.8 bits (68), Expect(2) = 2e-12
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 242 MPGMPGIDNNDNWEV 198
           MPG+PGID NDNWEV
Sbjct: 304 MPGVPGID-NDNWEV 317


>gb|ADO64264.1| eukaryotic initiation factor iso4G [Carica papaya]
          Length = 801

 Score = 63.2 bits (152), Expect(2) = 1e-11
 Identities = 35/63 (55%), Positives = 41/63 (65%)
 Frame = -2

Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19
           PR RSMPRG  + MQ    V +P  NK T++NSKLL QG  G+I GRTS LLQG+    P
Sbjct: 535 PRTRSMPRGAGAGMQPGGRVPSPLVNKSTSMNSKLLPQGSGGIISGRTSALLQGSN-PPP 593

Query: 18  GRP 10
            RP
Sbjct: 594 ARP 596



 Score = 31.2 bits (69), Expect(2) = 1e-11
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 242 MPGMPGIDNNDNWEV 198
           MPGMPG+D NDNWEV
Sbjct: 521 MPGMPGMD-NDNWEV 534


>ref|XP_003610290.1| Eukaryotic initiation factor iso-4F subunit p82-34 [Medicago
           truncatula] gi|355511345|gb|AES92487.1| Eukaryotic
           initiation factor iso-4F subunit p82-34 [Medicago
           truncatula]
          Length = 779

 Score = 61.2 bits (147), Expect(2) = 2e-11
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = -2

Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19
           PR RSMPRGD+S  Q+     +P+ +KP+ +NSKLL QG +G+I G+ S L+ G G  S 
Sbjct: 514 PRTRSMPRGDMSGAQTGGRGQSPYLSKPSVINSKLLPQGSSGLISGKNSALVLGGGTPS- 572

Query: 18  GRPSN 4
             PSN
Sbjct: 573 ALPSN 577



 Score = 32.3 bits (72), Expect(2) = 2e-11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 242 MPGMPGIDNNDNWEV 198
           MPGMPGID NDNWEV
Sbjct: 500 MPGMPGID-NDNWEV 513