BLASTX nr result
ID: Coptis21_contig00013344
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013344 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003549536.1| PREDICTED: eukaryotic initiation factor iso-... 72 3e-14 ref|XP_003549535.1| PREDICTED: eukaryotic initiation factor iso-... 72 3e-14 ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit ... 66 2e-12 gb|ADO64264.1| eukaryotic initiation factor iso4G [Carica papaya] 63 1e-11 ref|XP_003610290.1| Eukaryotic initiation factor iso-4F subunit ... 61 2e-11 >ref|XP_003549536.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like isoform 2 [Glycine max] Length = 792 Score = 71.6 bits (174), Expect(2) = 3e-14 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = -2 Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19 P+ RSMPRGD+S MQ+ H +PF +K + VNS+LL QG G+I GR+S L+ G GA S Sbjct: 526 PKTRSMPRGDMSGMQTGGHSQSPFLSKTSTVNSRLLPQGSGGIISGRSSALVHGAGAPSA 585 Query: 18 GRPSN 4 RP N Sbjct: 586 ARPPN 590 Score = 31.2 bits (69), Expect(2) = 3e-14 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -3 Query: 242 MPGMPGIDNNDNWEV 198 MPGMPGID NDNWE+ Sbjct: 512 MPGMPGID-NDNWEM 525 >ref|XP_003549535.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like isoform 1 [Glycine max] Length = 789 Score = 71.6 bits (174), Expect(2) = 3e-14 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = -2 Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19 P+ RSMPRGD+S MQ+ H +PF +K + VNS+LL QG G+I GR+S L+ G GA S Sbjct: 523 PKTRSMPRGDMSGMQTGGHSQSPFLSKTSTVNSRLLPQGSGGIISGRSSALVHGAGAPSA 582 Query: 18 GRPSN 4 RP N Sbjct: 583 ARPPN 587 Score = 31.2 bits (69), Expect(2) = 3e-14 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -3 Query: 242 MPGMPGIDNNDNWEV 198 MPGMPGID NDNWE+ Sbjct: 509 MPGMPGID-NDNWEM 522 >ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit p82-34, putative [Ricinus communis] gi|223525907|gb|EEF28321.1| Eukaryotic initiation factor iso-4F subunit p82-34, putative [Ricinus communis] Length = 587 Score = 65.9 bits (159), Expect(2) = 2e-12 Identities = 35/65 (53%), Positives = 44/65 (67%) Frame = -2 Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19 PR RSMPRGD S MQ V +P NK ++VN++LL QG G + G++S LLQG+G SP Sbjct: 318 PRTRSMPRGDGSTMQPTGRVPSPMFNKSSSVNTRLLPQGSGGFMSGKSSALLQGSGGPSP 377 Query: 18 GRPSN 4 RP N Sbjct: 378 -RPCN 381 Score = 30.8 bits (68), Expect(2) = 2e-12 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -3 Query: 242 MPGMPGIDNNDNWEV 198 MPG+PGID NDNWEV Sbjct: 304 MPGVPGID-NDNWEV 317 >gb|ADO64264.1| eukaryotic initiation factor iso4G [Carica papaya] Length = 801 Score = 63.2 bits (152), Expect(2) = 1e-11 Identities = 35/63 (55%), Positives = 41/63 (65%) Frame = -2 Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19 PR RSMPRG + MQ V +P NK T++NSKLL QG G+I GRTS LLQG+ P Sbjct: 535 PRTRSMPRGAGAGMQPGGRVPSPLVNKSTSMNSKLLPQGSGGIISGRTSALLQGSN-PPP 593 Query: 18 GRP 10 RP Sbjct: 594 ARP 596 Score = 31.2 bits (69), Expect(2) = 1e-11 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -3 Query: 242 MPGMPGIDNNDNWEV 198 MPGMPG+D NDNWEV Sbjct: 521 MPGMPGMD-NDNWEV 534 >ref|XP_003610290.1| Eukaryotic initiation factor iso-4F subunit p82-34 [Medicago truncatula] gi|355511345|gb|AES92487.1| Eukaryotic initiation factor iso-4F subunit p82-34 [Medicago truncatula] Length = 779 Score = 61.2 bits (147), Expect(2) = 2e-11 Identities = 32/65 (49%), Positives = 43/65 (66%) Frame = -2 Query: 198 PRGRSMPRGDLSAMQSVMHV*APFTNKPTAVNSKLLTQGCAGVIIGRTSLLLQGNGASSP 19 PR RSMPRGD+S Q+ +P+ +KP+ +NSKLL QG +G+I G+ S L+ G G S Sbjct: 514 PRTRSMPRGDMSGAQTGGRGQSPYLSKPSVINSKLLPQGSSGLISGKNSALVLGGGTPS- 572 Query: 18 GRPSN 4 PSN Sbjct: 573 ALPSN 577 Score = 32.3 bits (72), Expect(2) = 2e-11 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = -3 Query: 242 MPGMPGIDNNDNWEV 198 MPGMPGID NDNWEV Sbjct: 500 MPGMPGID-NDNWEV 513