BLASTX nr result

ID: Coptis21_contig00013324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013324
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280880.2| PREDICTED: uncharacterized protein LOC100254...   289   1e-75
emb|CBI36756.3| unnamed protein product [Vitis vinifera]              289   1e-75
ref|XP_002328433.1| predicted protein [Populus trichocarpa] gi|2...   283   6e-74
ref|XP_002512363.1| protein binding protein, putative [Ricinus c...   270   4e-70
ref|XP_004139186.1| PREDICTED: E3 ubiquitin-protein ligase Topor...   260   5e-67

>ref|XP_002280880.2| PREDICTED: uncharacterized protein LOC100254480 [Vitis vinifera]
          Length = 271

 Score =  289 bits (739), Expect = 1e-75
 Identities = 141/267 (52%), Positives = 180/267 (67%)
 Frame = -1

Query: 1074 NMQQEEEKTSFSSNDYNPCPICLGPVTHEAYLDRCFHKYCYNCIARWAKFVAAHHSQPTS 895
            N  ++       S   NPCPICLGPV  ++YLD+CFHK+CY+CI RW K VA+ H + +S
Sbjct: 3    NQSKDTSCNDSPSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKHCRLSS 62

Query: 894  ILKCPFCKSDNFSIVYECEGDSFQRHYINQDPETSTFYSRAHKFRLRCYYREPGAITDKF 715
             +KCPFCK++NFSIV+  +G SFQ+HYINQD   S  +S+AHK+RL+CYY EPG + DKF
Sbjct: 63   TIKCPFCKTENFSIVHGYDGSSFQQHYINQDFGKSFSFSKAHKYRLQCYYTEPGILNDKF 122

Query: 714  NVLQYWKVRRYLQPNKWLQIWLKREIQALTQXXXXXXXXXXXXXXXESFLRQNERGMSKR 535
            NV +YWK  +Y QPN+WLQ WL+REIQAL Q               +S +++ E+     
Sbjct: 123  NVSRYWKFHKYRQPNQWLQAWLRREIQALIQEEDVDIIVHHILGVLDSVIKRTEQKGQTI 182

Query: 534  TIEQNREYFKASLCDAARPFLMGRTERFVNEVELFLASGLTIEAYDEVYSECLETPASSA 355
            T E+ +E FKAS+ DAARPFL GRT+RFVNEVELFLASGL IEAYDEVY + L      A
Sbjct: 183  TPERKQEEFKASVSDAARPFLTGRTDRFVNEVELFLASGLNIEAYDEVYLQQLGWTNPMA 242

Query: 354  ISEDEETMPHKLNTELPYLHFFDEDSD 274
             +E  E      +  +PYL+ FD DSD
Sbjct: 243  TTEGVEEQNGHTHV-VPYLYLFDYDSD 268


>emb|CBI36756.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  289 bits (739), Expect = 1e-75
 Identities = 141/267 (52%), Positives = 180/267 (67%)
 Frame = -1

Query: 1074 NMQQEEEKTSFSSNDYNPCPICLGPVTHEAYLDRCFHKYCYNCIARWAKFVAAHHSQPTS 895
            N  ++       S   NPCPICLGPV  ++YLD+CFHK+CY+CI RW K VA+ H + +S
Sbjct: 31   NQSKDTSCNDSPSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKHCRLSS 90

Query: 894  ILKCPFCKSDNFSIVYECEGDSFQRHYINQDPETSTFYSRAHKFRLRCYYREPGAITDKF 715
             +KCPFCK++NFSIV+  +G SFQ+HYINQD   S  +S+AHK+RL+CYY EPG + DKF
Sbjct: 91   TIKCPFCKTENFSIVHGYDGSSFQQHYINQDFGKSFSFSKAHKYRLQCYYTEPGILNDKF 150

Query: 714  NVLQYWKVRRYLQPNKWLQIWLKREIQALTQXXXXXXXXXXXXXXXESFLRQNERGMSKR 535
            NV +YWK  +Y QPN+WLQ WL+REIQAL Q               +S +++ E+     
Sbjct: 151  NVSRYWKFHKYRQPNQWLQAWLRREIQALIQEEDVDIIVHHILGVLDSVIKRTEQKGQTI 210

Query: 534  TIEQNREYFKASLCDAARPFLMGRTERFVNEVELFLASGLTIEAYDEVYSECLETPASSA 355
            T E+ +E FKAS+ DAARPFL GRT+RFVNEVELFLASGL IEAYDEVY + L      A
Sbjct: 211  TPERKQEEFKASVSDAARPFLTGRTDRFVNEVELFLASGLNIEAYDEVYLQQLGWTNPMA 270

Query: 354  ISEDEETMPHKLNTELPYLHFFDEDSD 274
             +E  E      +  +PYL+ FD DSD
Sbjct: 271  TTEGVEEQNGHTHV-VPYLYLFDYDSD 296


>ref|XP_002328433.1| predicted protein [Populus trichocarpa] gi|222838148|gb|EEE76513.1|
            predicted protein [Populus trichocarpa]
          Length = 271

 Score =  283 bits (724), Expect = 6e-74
 Identities = 132/271 (48%), Positives = 179/271 (66%)
 Frame = -1

Query: 1086 MEEDNMQQEEEKTSFSSNDYNPCPICLGPVTHEAYLDRCFHKYCYNCIARWAKFVAAHHS 907
            M++ +    +E  S SS+D NPCPICL P   E+YLD CFHK+CY CI +W K V++  S
Sbjct: 1    MDQQDSNSNKENQSCSSSDSNPCPICLAPFLQESYLDTCFHKFCYKCILQWTKVVSSKKS 60

Query: 906  QPTSILKCPFCKSDNFSIVYECEGDSFQRHYINQDPETSTFYSRAHKFRLRCYYREPGAI 727
            +  S +KCP CK+DNFS++Y  +G SFQRHY+NQ  E S+F+S+AHK+RL+CYY EPG +
Sbjct: 61   RRPSSVKCPLCKTDNFSLIYGYDGSSFQRHYVNQGFEDSSFFSKAHKYRLQCYYTEPGIL 120

Query: 726  TDKFNVLQYWKVRRYLQPNKWLQIWLKREIQALTQXXXXXXXXXXXXXXXESFLRQNERG 547
             D  NV ++WK+R+YLQPN+WLQ WL+RE+Q+L Q                SF  +NE  
Sbjct: 121  NDTINVSRFWKLRKYLQPNRWLQSWLRREVQSLLQEEDIEVILYHILGTVNSFFSRNEHM 180

Query: 546  MSKRTIEQNREYFKASLCDAARPFLMGRTERFVNEVELFLASGLTIEAYDEVYSECLETP 367
               +T E  +E FKA + +AARPFL  +T+RFV E+ELFLASGL IEAYDEVY + +   
Sbjct: 181  RQTKTPETKQEEFKAVVSNAARPFLTAKTDRFVIELELFLASGLNIEAYDEVYLQQMGWN 240

Query: 366  ASSAISEDEETMPHKLNTELPYLHFFDEDSD 274
                     E++ H  N  +PYL+ FD +S+
Sbjct: 241  TPKTTEAGGESIEH--NPVVPYLYIFDANSE 269


>ref|XP_002512363.1| protein binding protein, putative [Ricinus communis]
            gi|223548324|gb|EEF49815.1| protein binding protein,
            putative [Ricinus communis]
          Length = 276

 Score =  270 bits (691), Expect = 4e-70
 Identities = 133/273 (48%), Positives = 172/273 (63%), Gaps = 7/273 (2%)
 Frame = -1

Query: 1071 MQQEEEKT------SFSSNDYNPCPICLGPVTHEAYLDRCFHKYCYNCIARWAKFVAA-H 913
            M QEE KT      S  S D NPCPICLGP   E+YLD CFHK+CYNCI  W K +    
Sbjct: 1    MDQEEPKTVENQSSSSPSGDSNPCPICLGPFIQESYLDTCFHKFCYNCILHWTKVIGRKR 60

Query: 912  HSQPTSILKCPFCKSDNFSIVYECEGDSFQRHYINQDPETSTFYSRAHKFRLRCYYREPG 733
            HS   S +KCP CK++N SI+Y  +G SFQRHY N   + S+F+S+ HK+RL+CYY + G
Sbjct: 61   HSPSPSSVKCPLCKTENHSIIYGFDGSSFQRHYTNVICQNSSFFSKEHKYRLQCYYTKSG 120

Query: 732  AITDKFNVLQYWKVRRYLQPNKWLQIWLKREIQALTQXXXXXXXXXXXXXXXESFLRQNE 553
            +++   NVL+YWK R+YLQPN+WLQ WL+REIQAL Q               +SF +++E
Sbjct: 121  SLSKIVNVLRYWKSRKYLQPNRWLQRWLRREIQALLQEEDVEIILHHILGVVDSFQKRSE 180

Query: 552  RGMSKRTIEQNREYFKASLCDAARPFLMGRTERFVNEVELFLASGLTIEAYDEVYSECLE 373
            +       E  +  F+  + DAARPFL  RT+ FVNE+ELFLASG  IEAYDEVY + L 
Sbjct: 181  KTHQMNMPETKQSEFRTLVSDAARPFLAARTDWFVNELELFLASGFNIEAYDEVYMQQLG 240

Query: 372  TPASSAISEDEETMPHKLNTELPYLHFFDEDSD 274
              A +   E  +  P +    +PYL+ FD+DSD
Sbjct: 241  WNAPTVTGEAADAEPSEQRPVIPYLYIFDDDSD 273


>ref|XP_004139186.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis sativus]
          Length = 274

 Score =  260 bits (664), Expect = 5e-67
 Identities = 125/274 (45%), Positives = 175/274 (63%), Gaps = 3/274 (1%)
 Frame = -1

Query: 1086 MEEDNMQQEEEKTSFSSNDY-NPCPICLGPVTHEAYLDRCFHKYCYNCIARWAKFVAAHH 910
            ME  +    E +T  S++DY NPCPICLGP+   +YLD+CFH +CYNCI +W K V+   
Sbjct: 1    MELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKR 60

Query: 909  SQPTSILKCPFCKSDNFSIVYECEGDSFQRHYINQDPETSTFYSRAHKFRLRCYYREPGA 730
            S   S +KCP CK+++ SI++  +G +FQRHY+N D + S   S+AH++RL+CYY EPG 
Sbjct: 61   SCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGF 120

Query: 729  ITDKFNVLQYWKVRRYLQPNKWLQIWLKREIQALTQXXXXXXXXXXXXXXXESFLRQNER 550
            + D F+V +YWK+++YLQ N+WL++WLKRE+QAL Q                SF R+NE 
Sbjct: 121  LNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEP 180

Query: 549  GMSKRTIEQNREYFKASLCDAARPFLMGRTERFVNEVELFLASGLTIEAYDEVYSECL-- 376
                 T E  R+ F  ++ DAA+PFL  R +RF+ E+ELFLASGL IEAYD VY + L  
Sbjct: 181  EYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGW 240

Query: 375  ETPASSAISEDEETMPHKLNTELPYLHFFDEDSD 274
              P   +++ +E+     L +  PYL+ FD D D
Sbjct: 241  NKPIVPSVANEEDL---GLKSVTPYLYIFDCDPD 271


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