BLASTX nr result
ID: Coptis21_contig00013303
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013303 (324 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517667.1| pentatricopeptide repeat-containing protein,... 155 4e-36 emb|CBI38165.3| unnamed protein product [Vitis vinifera] 152 2e-35 ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi... 152 2e-35 ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ... 142 3e-32 ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31 >ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 628 Score = 155 bits (391), Expect = 4e-36 Identities = 70/107 (65%), Positives = 88/107 (82%) Frame = -3 Query: 322 MVSDLSIPDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGC 143 +V DLS DS+ FA +L +CLK+KS+RD+ ++HARIIKTQFA E+FIQNRLID Y KCGC Sbjct: 10 IVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGC 69 Query: 142 LKDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPEPDQ 2 D+RK+FD+MP KN F+WN+I++ L KSGFLDE +LF SMPEPDQ Sbjct: 70 FDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQ 116 Score = 72.4 bits (176), Expect = 4e-11 Identities = 31/92 (33%), Positives = 57/92 (61%) Frame = -3 Query: 286 FADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGCLKDSRKLFDKMP 107 F L C K ++ T++H ++K+QF ++++ + LID+Y+KCG + ++++FD M Sbjct: 154 FGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMM 213 Query: 106 HKNTFTWNSIITALTKSGFLDEAFKLFKSMPE 11 +N +WNS+IT ++G EA ++F M E Sbjct: 214 ERNVVSWNSLITCYEQNGPSREALEIFMRMME 245 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 6/101 (5%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFA------SEIFIQNRLIDVYAKCGCL 140 P F ++L C ++ + HA ++K F S++F+ N LID+Y KCG + Sbjct: 383 PTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKCGSV 442 Query: 139 KDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSM 17 ++ ++F+ M ++ +WN++I ++G+ EA LF+ M Sbjct: 443 EEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKM 483 Score = 63.5 bits (153), Expect = 2e-08 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKT-QFASEIFIQNRLIDVYAKCGCLKDSRK 125 PD A ++ C + + ++HA ++K + ++ + N L+D+YAKCG + ++R Sbjct: 250 PDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARC 309 Query: 124 LFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPE 11 +FD+MP +N + S+++ K+ + A LF M E Sbjct: 310 VFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIE 347 >emb|CBI38165.3| unnamed protein product [Vitis vinifera] Length = 654 Score = 152 bits (385), Expect = 2e-35 Identities = 71/107 (66%), Positives = 89/107 (83%) Frame = -3 Query: 322 MVSDLSIPDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGC 143 +V DL +P+S+ FA +L +CL+++S R + VHARI+ TQF+ EIFIQNRLIDVY KC C Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65 Query: 142 LKDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPEPDQ 2 L D+RKLFD+MP +NTFTWNS+I+ LTKSGFLDEA +LF SMPEPDQ Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQ 112 Score = 68.6 bits (166), Expect = 5e-10 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 4/99 (4%) Frame = -3 Query: 286 FADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGCLKDSRKLFDKMP 107 F L C + T+VHA + K+++++++++ + LID+Y+KCG + + ++F M Sbjct: 150 FGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMI 209 Query: 106 HKNTFTWNSIITALTKSGFLDEAFKLFKSMP----EPDQ 2 +N TWNS+IT ++G EA ++F M EPD+ Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 32/125 (25%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKT-QFASEIFIQNRLIDVYAKCGCLKDSRK 125 PD A ++ C ++++ ++HAR++KT +F ++ + N L+D+YAKC + ++R+ Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305 Query: 124 LFD-------------------------------KMPHKNTFTWNSIITALTKSGFLDEA 38 +FD KM +N +WN++I T++G +EA Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365 Query: 37 FKLFK 23 +LF+ Sbjct: 366 LRLFR 370 Score = 62.4 bits (150), Expect = 4e-08 Identities = 29/82 (35%), Positives = 51/82 (62%) Frame = -3 Query: 262 LKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGCLKDSRKLFDKMPHKNTFTWN 83 LK +SI + ++K S+IF+ N LID+Y KCG ++D ++F+KM ++ +WN Sbjct: 372 LKRESIWPTHYTFGNLLK----SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWN 427 Query: 82 SIITALTKSGFLDEAFKLFKSM 17 +II ++G+ EA ++F+ M Sbjct: 428 AIIVGYAQNGYGAEALQIFRKM 449 >ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Vitis vinifera] Length = 684 Score = 152 bits (385), Expect = 2e-35 Identities = 71/107 (66%), Positives = 89/107 (83%) Frame = -3 Query: 322 MVSDLSIPDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGC 143 +V DL +P+S+ FA +L +CL+++S R + VHARI+ TQF+ EIFIQNRLIDVY KC C Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65 Query: 142 LKDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPEPDQ 2 L D+RKLFD+MP +NTFTWNS+I+ LTKSGFLDEA +LF SMPEPDQ Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQ 112 Score = 68.9 bits (167), Expect = 4e-10 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 6/101 (5%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFA------SEIFIQNRLIDVYAKCGCL 140 P F ++L C + + H ++K F S+IF+ N LID+Y KCG + Sbjct: 379 PTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSI 438 Query: 139 KDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSM 17 +D ++F+KM ++ +WN+II ++G+ EA ++F+ M Sbjct: 439 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKM 479 Score = 68.6 bits (166), Expect = 5e-10 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 4/99 (4%) Frame = -3 Query: 286 FADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGCLKDSRKLFDKMP 107 F L C + T+VHA + K+++++++++ + LID+Y+KCG + + ++F M Sbjct: 150 FGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMI 209 Query: 106 HKNTFTWNSIITALTKSGFLDEAFKLFKSMP----EPDQ 2 +N TWNS+IT ++G EA ++F M EPD+ Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 32/125 (25%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKT-QFASEIFIQNRLIDVYAKCGCLKDSRK 125 PD A ++ C ++++ ++HAR++KT +F ++ + N L+D+YAKC + ++R+ Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305 Query: 124 LFD-------------------------------KMPHKNTFTWNSIITALTKSGFLDEA 38 +FD KM +N +WN++I T++G +EA Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365 Query: 37 FKLFK 23 +LF+ Sbjct: 366 LRLFR 370 >ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 705 Score = 142 bits (358), Expect = 3e-32 Identities = 68/107 (63%), Positives = 86/107 (80%) Frame = -3 Query: 322 MVSDLSIPDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGC 143 +V DLS DS+ FA +L TC+K+KS+ ++ VHARIIKTQF+SEIFIQNRL+DVY KCG Sbjct: 10 VVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGF 69 Query: 142 LKDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPEPDQ 2 L+D+RK+FD M +NTF+WN+++ ALTK G LDEA LFK MPE DQ Sbjct: 70 LEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQ 116 Score = 68.2 bits (165), Expect = 7e-10 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 6/101 (5%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKTQF------ASEIFIQNRLIDVYAKCGCL 140 P F ++L C ++ + H I+K F S+IF+ N LID+Y KCG + Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLV 442 Query: 139 KDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSM 17 +D R +F++M ++ +WN++I ++G+ EA ++F+ M Sbjct: 443 EDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREM 483 Score = 64.7 bits (156), Expect = 8e-09 Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIK-TQFASEIFIQNRLIDVYAKCGCLKDSRK 125 PD A + C +IR+ ++HAR++K ++ +++ + N L+D+YAKC + ++R Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309 Query: 124 LFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPE 11 +FD+MP ++ + S+++ K+ + A +F +M E Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMME 347 Score = 60.5 bits (145), Expect = 1e-07 Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Frame = -3 Query: 286 FADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGCLKDSRKLFDKMP 107 F L C + ++H I K++++ ++++ + L+D+Y+KC + +++ FD M Sbjct: 154 FGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMD 213 Query: 106 HKNTFTWNSIITALTKSGFLDEAFKLFKSMP----EPDQ 2 +N +WNS+IT ++G +A ++F M EPD+ Sbjct: 214 VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDE 252 >ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Glycine max] Length = 705 Score = 140 bits (352), Expect = 1e-31 Identities = 63/107 (58%), Positives = 88/107 (82%) Frame = -3 Query: 322 MVSDLSIPDSTLFADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGC 143 +V +L DS+ FA +L +C+++KS D+ ++HARIIKTQF+SEIFIQNRL+D Y KCG Sbjct: 10 LVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGY 69 Query: 142 LKDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPEPDQ 2 +D+RK+FD+MP +NTF++N++++ LTK G LDEAF +FKSMPEPDQ Sbjct: 70 FEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQ 116 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKT-QFASEIFIQNRLIDVYAKCGCLKDSRK 125 PD A ++ C +IR+ ++HAR++K ++ +++ + N L+D+YAKC + ++R Sbjct: 250 PDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARL 309 Query: 124 LFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSMPE 11 +FD+MP +N + S++ ++ + A +F +M E Sbjct: 310 VFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMME 347 Score = 64.3 bits (155), Expect = 1e-08 Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 6/101 (5%) Frame = -3 Query: 301 PDSTLFADILKTCLKTKSIRDSTKVHARIIKTQF------ASEIFIQNRLIDVYAKCGCL 140 P F ++L C ++ + H +I+K F S+IF+ N LID+Y KCG + Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMV 442 Query: 139 KDSRKLFDKMPHKNTFTWNSIITALTKSGFLDEAFKLFKSM 17 +D +F++M ++ +WN++I ++G+ A ++F+ M Sbjct: 443 EDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKM 483 Score = 62.4 bits (150), Expect = 4e-08 Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 4/99 (4%) Frame = -3 Query: 286 FADILKTCLKTKSIRDSTKVHARIIKTQFASEIFIQNRLIDVYAKCGCLKDSRKLFDKMP 107 F L C + ++HA I K+++ ++++ + L+D+Y+KCG + +++ FD M Sbjct: 154 FGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMA 213 Query: 106 HKNTFTWNSIITALTKSGFLDEAFKLFKSM----PEPDQ 2 +N +WNS+IT ++G +A ++F M EPD+ Sbjct: 214 VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDE 252