BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013297
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   139   3e-31
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...   122   6e-26
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   110   2e-22
emb|CBI36742.3| unnamed protein product [Vitis vinifera]              109   5e-22
ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   105   7e-21

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  139 bits (351), Expect = 3e-31
 Identities = 90/202 (44%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
 Frame = -3

Query: 623 SITIPDNQTRENSSAPDVINPMQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGEN 444
           SI + D++T +   APDVINP Q   QNRP RS S RP+   KFPRSHSTGHSLIQPGEN
Sbjct: 228 SIRVADDET-DVQQAPDVINPNQSLHQNRPPRSKSTRPR---KFPRSHSTGHSLIQPGEN 283

Query: 443 MERFTLRLPEDIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKYNR 264
            ERFTL+LPED+RK+I+   LNRTTSL+  P                          + R
Sbjct: 284 CERFTLKLPEDVRKQIMKRALNRTTSLLVLP-----RDGSSRQGYRTAGEGSSRGKNFRR 338

Query: 263 FWRLDSKAKSDRWVFSMAPPFISRGGSVRRD----DGEGSVKEGNGKSFLT---SVKSVK 105
           F RL+   KSDRW FS+ PPF SR  S++      DGE +      K  LT   S  + +
Sbjct: 339 FDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGEATSSTSPRKPTLTPKASFGAKR 398

Query: 104 TPFDCLAVKVDGEMPSSSRPPV 39
            P     V    +   S RPPV
Sbjct: 399 DPAGTPPVGSPRQPVGSPRPPV 420


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
           gi|223547072|gb|EEF48569.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 436

 Score =  122 bits (306), Expect = 6e-26
 Identities = 69/174 (39%), Positives = 96/174 (55%)
 Frame = -3

Query: 593 ENSSAPDVINPMQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPE 414
           +N  +PDVI+ +    QNRP RS S   + +  FPRSHSTGHSL+QPGEN++RFTLRLPE
Sbjct: 242 QNQQSPDVIS-LSTASQNRPPRSWSTGWRFARLFPRSHSTGHSLVQPGENLDRFTLRLPE 300

Query: 413 DIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKYNRFWRLDSKAKS 234
           D+R +++N  LNR  S V+FP                          +  + R D + + 
Sbjct: 301 DVRSQLLNTHLNRAKSCVAFP-----RASSSKKGYRSRSGGGWRGRNFYFYERFDEEVRP 355

Query: 233 DRWVFSMAPPFISRGGSVRRDDGEGSVKEGNGKSFLTSVKSVKTPFDCLAVKVD 72
           +    ++ PPFISR GS++   G GS  E N       +KS+K+PFD L +  D
Sbjct: 356 EHSGLTLTPPFISRTGSIQSSKGVGSNDEANATPPKNFLKSIKSPFDQLFLNAD 409


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  110 bits (276), Expect = 2e-22
 Identities = 69/168 (41%), Positives = 93/168 (55%)
 Frame = -3

Query: 590 NSSAPDVINPMQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPED 411
           ++ +PDV+N  +    NRP RS S R +I+G FPRSHSTGHSLIQPGEN ERFTLRLPE+
Sbjct: 230 DAQSPDVMNHGR-DTPNRPPRSRSIRARITGMFPRSHSTGHSLIQPGENRERFTLRLPEE 288

Query: 410 IRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKYNRFWRLDSKAKSD 231
           IR +I+N  L+RT S V+ P                          Y  + + + + +++
Sbjct: 289 IRNQIMNTSLSRTKSWVALPG-----VQSSKRGYRANSVGSLRGKTYFNYEQFNGEVRAE 343

Query: 230 RWVFSMAPPFISRGGSVRRDDGEGSVKEGNGKSFLTSVKSVKTPFDCL 87
           R  FSM PPF+ R GS      +G       K   T  +S+K+PFD L
Sbjct: 344 RLGFSMTPPFVPRTGSSHARSPQGCEGSLTPK---TLFRSLKSPFDRL 388


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  109 bits (272), Expect = 5e-22
 Identities = 70/167 (41%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
 Frame = -3

Query: 518 RRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKKIVNGKLNRTTSLVSFPAXXX 339
           RR +I+  FPRSHSTGHSLIQPGEN ERFTL+LPED+RK+I+   LNRTTSL+  P    
Sbjct: 245 RRSEINA-FPRSHSTGHSLIQPGENCERFTLKLPEDVRKQIMKRALNRTTSLLVLP---- 299

Query: 338 XXXXXXXXXXXXXXXXXXXXGKYNRFWRLDSKAKSDRWVFSMAPPFISRGGSVRRD---- 171
                                 + RF RL+   KSDRW FS+ PPF SR  S++      
Sbjct: 300 -RDGSSRQGYRTAGEGSSRGKNFRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAA 358

Query: 170 DGEGSVKEGNGKSFLT---SVKSVKTPFDCLAVKVDGEMPSSSRPPV 39
           DGE +      K  LT   S  + + P     V    +   S RPP+
Sbjct: 359 DGEATSSTSPRKPTLTPKASFGAKRDPAGTPPVGSPRQPVGSPRPPL 405


>ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 375

 Score =  105 bits (262), Expect = 7e-21
 Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = -3

Query: 611 PDNQTRENSSA---PDVINPMQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENM 441
           P+ Q  E       P+V++  +   +NR   S S RP+   +FPRSHSTGHSL+QPGEN 
Sbjct: 203 PEQQNAEADPVLPEPEVVSLDKTLNRNRTRGSRSNRPR---RFPRSHSTGHSLVQPGENT 259

Query: 440 ERFTLRLPEDIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKYNRF 261
           +RFTLRLP ++RK+++N +L R +SL+  P                        GK +R 
Sbjct: 260 DRFTLRLPLEVRKQLINRQLQRASSLIVLP------REGSLRQGYRTGGEGSSRGKISR- 312

Query: 260 WRLDSKAKSDRWVFSMAPPFISRGGSVRRDDGEGSVKEGNGKSFLTSVKSVKTP 99
            RLD   KSDRW+FSMA PF +R  S+R      +  EG   S  +S   +  P
Sbjct: 313 -RLDRSLKSDRWIFSMAAPFFARALSIRSPRVRNNDVEGTASSSSSSTAPILPP 365