BLASTX nr result

ID: Coptis21_contig00013283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013283
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167788.1| PREDICTED: superoxide dismutase [Cu-Zn], chl...   291   1e-76
gb|AFH08801.1| chloroplast Cu/Zn-superoxide dismutase 1B-a [Prun...   290   3e-76
ref|XP_004145768.1| PREDICTED: superoxide dismutase [Cu-Zn], chl...   290   4e-76
gb|AFU52880.1| chloroplast copper-zinc superoxide dismutase [Vit...   289   7e-76
gb|AFH08800.1| chloroplast Cu/Zn-superoxide dismutase 1A-a [Prun...   289   7e-76

>ref|XP_004167788.1| PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic-like
           [Cucumis sativus]
          Length = 221

 Score =  291 bits (746), Expect = 1e-76
 Identities = 155/223 (69%), Positives = 169/223 (75%), Gaps = 8/223 (3%)
 Frame = +1

Query: 28  MQAILAVMAAQTLLTAT--------PYQQPLISNPKTHSFQSSFILKLPSHSLKLATTTS 183
           MQA+LA MAAQ+LL+ +        P+     S   T SF  +  LKLP HSL LA + +
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSLSLTSSFHGAS-LKLPRHSLSLAASVA 59

Query: 184 PKSSXXXXXXXXXXXXXLKGPSQVEGVVTLSQEDGGHTSVNVRVTGLTPGPHGFHLHEFG 363
           PK               LKG S VEGVVTL+QED G TSVNVR+TGLTPG HGFHLHEFG
Sbjct: 60  PKP-LAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 118

Query: 364 DTTNGCISTGPHFNPNGLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDTQIPLSGPNA 543
           DTTNGCISTG HFNPN LTHGAPEDE+RHAGDLGNI ANA+GVAEA IVD QIPLSGP +
Sbjct: 119 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 178

Query: 544 VVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 672
           VVGRAFVVHEL DDLGKGGHELSL+TGNAGGRLACGVVGLTPV
Sbjct: 179 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 221


>gb|AFH08801.1| chloroplast Cu/Zn-superoxide dismutase 1B-a [Prunus persica]
          Length = 223

 Score =  290 bits (742), Expect = 3e-76
 Identities = 154/227 (67%), Positives = 168/227 (74%), Gaps = 12/227 (5%)
 Frame = +1

Query: 28  MQAILAVMAAQTLLTATPYQQPLI--------SNPKTHSFQSSFILKLPS----HSLKLA 171
           MQA LA MAA TL+ +T Y  P +        S+P  HS      +KLP      S+ LA
Sbjct: 1   MQAALAAMAAHTLMLST-YSSPTLFSQIQSPNSHPLPHSSFHGLSVKLPLKSQFQSMSLA 59

Query: 172 TTTSPKSSXXXXXXXXXXXXXLKGPSQVEGVVTLSQEDGGHTSVNVRVTGLTPGPHGFHL 351
               P +              LKG S VEGVVTLSQED G T+VNVR+TGLTPGPHGFHL
Sbjct: 60  AAHKPLT---VVAATKKAVAVLKGNSSVEGVVTLSQEDDGPTTVNVRITGLTPGPHGFHL 116

Query: 352 HEFGDTTNGCISTGPHFNPNGLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDTQIPLS 531
           HE+GDTTNGCISTGPHFNP  LTHGAPEDE+RHAGDLGNIVANA+GVAEATIVD QIPL+
Sbjct: 117 HEYGDTTNGCISTGPHFNPKNLTHGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLT 176

Query: 532 GPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 672
           GPNAV+GRA VVHEL DDLGKGGHELSLSTGNAGGRLACGVVGLTPV
Sbjct: 177 GPNAVIGRALVVHELVDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 223


>ref|XP_004145768.1| PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic-like
           [Cucumis sativus]
          Length = 223

 Score =  290 bits (741), Expect = 4e-76
 Identities = 157/224 (70%), Positives = 170/224 (75%), Gaps = 9/224 (4%)
 Frame = +1

Query: 28  MQAILAVMAAQTLLTATPYQQ---PLISNPKTHS---FQSSF---ILKLPSHSLKLATTT 180
           MQA+LA MAAQ+LL+ +       P  SN  + S     SSF    LKLP HSL LA + 
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 181 SPKSSXXXXXXXXXXXXXLKGPSQVEGVVTLSQEDGGHTSVNVRVTGLTPGPHGFHLHEF 360
           +PK               LKG S VEGVVTL+QED G TSVNVR+TGLTPG HGFHLHEF
Sbjct: 61  APKP-LAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEF 119

Query: 361 GDTTNGCISTGPHFNPNGLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDTQIPLSGPN 540
           GDTTNGCISTG HFNPN LTHGAPEDE+RHAGDLGNI ANA+GVAEA IVD QIPLSGP 
Sbjct: 120 GDTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPY 179

Query: 541 AVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 672
           +VVGRAFVVHEL DDLGKGGHELSL+TGNAGGRLACGVVGLTPV
Sbjct: 180 SVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 223


>gb|AFU52880.1| chloroplast copper-zinc superoxide dismutase [Vitis vinifera]
          Length = 221

 Score =  289 bits (739), Expect = 7e-76
 Identities = 151/220 (68%), Positives = 166/220 (75%), Gaps = 7/220 (3%)
 Frame = +1

Query: 34  AILAVMAAQTLLTATPYQQPLI-------SNPKTHSFQSSFILKLPSHSLKLATTTSPKS 192
           A+LA MA  TLL+  P +  L         +P+ HS      LKL   S+ LAT   P S
Sbjct: 5   AVLAAMAVHTLLSTAPSRVFLSFPNPSPNPSPQLHSQFHGLSLKLTRQSIPLATAPKPLS 64

Query: 193 SXXXXXXXXXXXXXLKGPSQVEGVVTLSQEDGGHTSVNVRVTGLTPGPHGFHLHEFGDTT 372
                         LKG S VEGVVTLSQED G T+V+VR+TGLTPG HGFHLHEFGDTT
Sbjct: 65  ---VVAVTKKAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTT 121

Query: 373 NGCISTGPHFNPNGLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDTQIPLSGPNAVVG 552
           NGC+STG HFNPNG+THGAPED+VRHAGDLGNIVANAEGVAEATIVDTQIPLSGPNAV+G
Sbjct: 122 NGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIVANAEGVAEATIVDTQIPLSGPNAVIG 181

Query: 553 RAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 672
           RA VVHEL DDLGKGGHELSL+TGNAGGRLACGVVGLTP+
Sbjct: 182 RALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 221


>gb|AFH08800.1| chloroplast Cu/Zn-superoxide dismutase 1A-a [Prunus persica]
          Length = 223

 Score =  289 bits (739), Expect = 7e-76
 Identities = 153/227 (67%), Positives = 168/227 (74%), Gaps = 12/227 (5%)
 Frame = +1

Query: 28  MQAILAVMAAQTLLTATPYQQPLI--------SNPKTHSFQSSFILKLPS----HSLKLA 171
           MQA LA MAA TL+ +T Y  P +        S+P  HS      +KLP      S+ LA
Sbjct: 1   MQAALAAMAAHTLMLST-YSSPTLFSQIQSPNSHPLPHSSFHGLSVKLPLKSQFQSMSLA 59

Query: 172 TTTSPKSSXXXXXXXXXXXXXLKGPSQVEGVVTLSQEDGGHTSVNVRVTGLTPGPHGFHL 351
               P +              LKG S VEGVVTLSQED G T+VNVR+TGLTPGPHGFHL
Sbjct: 60  AAHKPLT---VVAATKKAVAVLKGNSSVEGVVTLSQEDDGPTTVNVRITGLTPGPHGFHL 116

Query: 352 HEFGDTTNGCISTGPHFNPNGLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDTQIPLS 531
           HE+GDTTNGCISTGPHFNP  LTHGAPEDE+RHAGDLGNIVANA+GVAEATIVD QIPL+
Sbjct: 117 HEYGDTTNGCISTGPHFNPKNLTHGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLT 176

Query: 532 GPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 672
           GPNAV+GRA VVHEL DDLGKGGHELS+STGNAGGRLACGVVGLTPV
Sbjct: 177 GPNAVIGRALVVHELVDDLGKGGHELSVSTGNAGGRLACGVVGLTPV 223


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