BLASTX nr result

ID: Coptis21_contig00013261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013261
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ28935.1| hypothetical protein OsJ_12979 [Oryza sativa Japo...   154   4e-35
gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]      149   7e-34
dbj|BAE71241.1| putative Argonaute protein [Trifolium pratense]       148   1e-33
ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brac...   148   1e-33
ref|XP_003548311.1| PREDICTED: protein argonaute 1-like [Glycine...   148   1e-33

>gb|EAZ28935.1| hypothetical protein OsJ_12979 [Oryza sativa Japonica Group]
          Length = 1024

 Score =  154 bits (388), Expect = 4e-35
 Identities = 76/117 (64%), Positives = 88/117 (75%)
 Frame = -1

Query: 911  GTVVDSMICHPSEFDFYLCSHAGIQGTSRPTHYQVLWDENSFNSDTMQMLTNNLCYTYAR 732
            GTVVD  ICHP+EFDFYLCSHAGIQGTSRPTHY VL+DEN F +D +Q LTNNLCYTYAR
Sbjct: 879  GTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYAR 938

Query: 731  CTRSVSVGKSLICIHFPVVLLTIFCSQFSAPYQFSAHLAAFRAHYYIEREDSDSGTT 561
            CTR+VSVG+     +F  + + I    F  P  + AHLAAFRA YY+E E SD G+T
Sbjct: 939  CTRAVSVGRRRSRPNF--IKIEIVSVYF--PPAYYAHLAAFRARYYVEGESSDGGST 991


>gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]
          Length = 941

 Score =  149 bits (377), Expect = 7e-34
 Identities = 73/117 (62%), Positives = 81/117 (69%)
 Frame = -1

Query: 911  GTVVDSMICHPSEFDFYLCSHAGIQGTSRPTHYQVLWDENSFNSDTMQMLTNNLCYTYAR 732
            GTVVD MICHP+EFDFYLCSHAGIQGTSRPTHY VL+DEN F +D +Q LTNNLCYTYAR
Sbjct: 814  GTVVDQMICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENEFTADALQSLTNNLCYTYAR 873

Query: 731  CTRSVSVGKSLICIHFPVVLLTIFCSQFSAPYQFSAHLAAFRAHYYIEREDSDSGTT 561
            CTR+VSV                       P  + AHLAAFRA YY+E E SD G+T
Sbjct: 874  CTRAVSV----------------------VPPAYYAHLAAFRARYYVEGESSDGGST 908


>dbj|BAE71241.1| putative Argonaute protein [Trifolium pratense]
          Length = 300

 Score =  148 bits (374), Expect = 1e-33
 Identities = 72/116 (62%), Positives = 81/116 (69%)
 Frame = -1

Query: 911 GTVVDSMICHPSEFDFYLCSHAGIQGTSRPTHYQVLWDENSFNSDTMQMLTNNLCYTYAR 732
           GTVVDS ICHP+EFDFYLCSHAGIQGTSRP HY VLWDEN+F +D +Q LTNNLCYTYAR
Sbjct: 162 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQSLTNNLCYTYAR 221

Query: 731 CTRSVSVGKSLICIHFPVVLLTIFCSQFSAPYQFSAHLAAFRAHYYIEREDSDSGT 564
           CTRSVS+                       P  + AHLAAFRA +Y+E E SDSG+
Sbjct: 222 CTRSVSI----------------------VPPAYYAHLAAFRARFYMEPETSDSGS 255


>ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brachypodium distachyon]
          Length = 1055

 Score =  148 bits (374), Expect = 1e-33
 Identities = 73/117 (62%), Positives = 81/117 (69%)
 Frame = -1

Query: 911  GTVVDSMICHPSEFDFYLCSHAGIQGTSRPTHYQVLWDENSFNSDTMQMLTNNLCYTYAR 732
            GTVVD MICHP+EFDFYLCSHAGIQGTSRPTHY VL+DEN F +D +Q LTNNLCYTYAR
Sbjct: 927  GTVVDLMICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYAR 986

Query: 731  CTRSVSVGKSLICIHFPVVLLTIFCSQFSAPYQFSAHLAAFRAHYYIEREDSDSGTT 561
            CTR+VSV                       P  + AHLAAFRA YY+E E SD G+T
Sbjct: 987  CTRAVSV----------------------VPPAYYAHLAAFRARYYVEGESSDGGST 1021


>ref|XP_003548311.1| PREDICTED: protein argonaute 1-like [Glycine max]
          Length = 1053

 Score =  148 bits (374), Expect = 1e-33
 Identities = 72/116 (62%), Positives = 81/116 (69%)
 Frame = -1

Query: 911  GTVVDSMICHPSEFDFYLCSHAGIQGTSRPTHYQVLWDENSFNSDTMQMLTNNLCYTYAR 732
            GTVVDS ICHP+EFDFYLCSHAGIQGTSRP HY VLWDEN+F +D +Q LTNNLCYTYAR
Sbjct: 916  GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYAR 975

Query: 731  CTRSVSVGKSLICIHFPVVLLTIFCSQFSAPYQFSAHLAAFRAHYYIEREDSDSGT 564
            CTRSVS+                       P  + AHLAAFRA +Y+E E SDSG+
Sbjct: 976  CTRSVSI----------------------VPPAYYAHLAAFRARFYMEPETSDSGS 1009


Top