BLASTX nr result

ID: Coptis21_contig00013255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013255
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40563.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002264409.1| PREDICTED: transcription factor bHLH13 [Viti...   110   9e-23
gb|ABV79897.1| Myc2 bHLH splice variant [Vitis vinifera]              108   4e-22
gb|ABR23669.1| Myc2 bHLH protein [Vitis vinifera]                     108   4e-22
ref|XP_004172828.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   100   1e-21

>emb|CBI40563.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 14/108 (12%)
 Frame = +2

Query: 2   TSTVSSEQALRAS*ESECIEC--------------SWNYVVFWQISRLKAGELFLGWGDG 139
           TS+V SE  L A    E ++               SWNY +FWQIS+ K+G+  LGWGDG
Sbjct: 34  TSSVVSENLLMAVGSDENLQTKLSDLVDRPNASNFSWNYAIFWQISQSKSGDWVLGWGDG 93

Query: 140 YCREPKEGEESETTFTLNVQIEEDETQQKMRKSILQKLNTYFGGSEEE 283
            CREP+EGEESE T  LN+++ EDETQQ+MRK +LQKL+T FGGS+E+
Sbjct: 94  SCREPREGEESEVTRILNIRL-EDETQQRMRKRVLQKLHTLFGGSDED 140


>ref|XP_002264409.1| PREDICTED: transcription factor bHLH13 [Vitis vinifera]
          Length = 608

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 14/108 (12%)
 Frame = +2

Query: 2   TSTVSSEQALRAS*ESECIEC--------------SWNYVVFWQISRLKAGELFLGWGDG 139
           TS+V SE  L A    E ++               SWNY +FWQIS+ K+G+  LGWGDG
Sbjct: 34  TSSVVSENLLMAVGSDENLQTKLSDLVDRPNASNFSWNYAIFWQISQSKSGDWVLGWGDG 93

Query: 140 YCREPKEGEESETTFTLNVQIEEDETQQKMRKSILQKLNTYFGGSEEE 283
            CREP+EGEESE T  LN+++ EDETQQ+MRK +LQKL+T FGGS+E+
Sbjct: 94  SCREPREGEESEVTRILNIRL-EDETQQRMRKRVLQKLHTLFGGSDED 140


>gb|ABV79897.1| Myc2 bHLH splice variant [Vitis vinifera]
          Length = 242

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 14/108 (12%)
 Frame = +2

Query: 2   TSTVSSEQALRAS*ESECIEC--------------SWNYVVFWQISRLKAGELFLGWGDG 139
           TS+V SE  L A    E ++               SWNY +FWQIS+ K+G+  LGWGDG
Sbjct: 34  TSSVVSENLLMAVGSDENLQTKLSDLVDRPNASNFSWNYAIFWQISQSKSGDWVLGWGDG 93

Query: 140 YCREPKEGEESETTFTLNVQIEEDETQQKMRKSILQKLNTYFGGSEEE 283
            CREP+EGEESE T  LN+++ ED TQQ+MRK +LQKL+T FGGS+E+
Sbjct: 94  SCREPREGEESEVTRILNIRL-EDATQQRMRKRVLQKLHTLFGGSDED 140


>gb|ABR23669.1| Myc2 bHLH protein [Vitis vinifera]
          Length = 608

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 14/108 (12%)
 Frame = +2

Query: 2   TSTVSSEQALRAS*ESECIEC--------------SWNYVVFWQISRLKAGELFLGWGDG 139
           TS+V SE  L A    E ++               SWNY +FWQIS+ K+G+  LGWGDG
Sbjct: 34  TSSVVSENLLMAVGSDENLQTKLSDLVDRPNASNFSWNYAIFWQISQSKSGDWVLGWGDG 93

Query: 140 YCREPKEGEESETTFTLNVQIEEDETQQKMRKSILQKLNTYFGGSEEE 283
            CREP+EGEESE T  LN+++ ED TQQ+MRK +LQKL+T FGGS+E+
Sbjct: 94  SCREPREGEESEVTRILNIRL-EDATQQRMRKRVLQKLHTLFGGSDED 140


>ref|XP_004172828.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH13-like
           [Cucumis sativus]
          Length = 621

 Score =  100 bits (249), Expect(2) = 1e-21
 Identities = 43/73 (58%), Positives = 60/73 (82%)
 Frame = +2

Query: 65  SWNYVVFWQISRLKAGELFLGWGDGYCREPKEGEESETTFTLNVQIEEDETQQKMRKSIL 244
           SWNY +FWQ+S  K+GE  LGWGDG CR+P++G+E+E T  L++Q+ EDE+QQ+M+K  L
Sbjct: 69  SWNYAIFWQLSHSKSGEWVLGWGDGSCRDPRDGDETEATQILSLQL-EDESQQRMKKRAL 127

Query: 245 QKLNTYFGGSEEE 283
           QKL+T FGGS+E+
Sbjct: 128 QKLHTLFGGSDED 140



 Score = 27.7 bits (60), Expect(2) = 1e-21
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 15 LQNKLSELVESPNVSS 62
          LQNKLS+LVE PN S+
Sbjct: 52 LQNKLSDLVERPNASN 67


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