BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013252
         (1721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522771.1| conserved hypothetical protein [Ricinus comm...    68   7e-11
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...    71   5e-10
emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]    71   5e-10
emb|CBI39748.3| unnamed protein product [Vitis vinifera]               71   5e-10
ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PAR...    62   5e-09

>ref|XP_002522771.1| conserved hypothetical protein [Ricinus communis]
           gi|223538009|gb|EEF39622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score = 67.8 bits (164), Expect(2) = 7e-11
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = -3

Query: 207 LMQQEVKDSKRKEAEMKLKVAVGFCHVIDLLCSEQKLVVGHNCFL 73
           L+ +EVKD  RK AEMK+K A+GF HVIDLL S QKL+VGHNCFL
Sbjct: 282 LLMKEVKDEYRKGAEMKIKNAIGFRHVIDLLSSAQKLIVGHNCFL 326



 Score = 26.9 bits (58), Expect(2) = 7e-11
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 70  FLALFLSTIEEFVSFVNEHFPSI 2
           FL     T EEFVS VN++FP I
Sbjct: 335 FLGPLPPTAEEFVSAVNKYFPHI 357


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score = 70.9 bits (172), Expect(2) = 5e-10
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = -3

Query: 207 LMQQEVKDSKRKEAEMKLKVAVGFCHVIDLLCSEQKLVVGHNCFL 73
           L+ +EVKD  R+EAEMK+K AVGF HVIDLL SEQKL+VGHNC L
Sbjct: 313 LLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLL 357



 Score = 21.2 bits (43), Expect(2) = 5e-10
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 49  TIEEFVSFVNEHFP 8
           T E+FVS ++++FP
Sbjct: 373 TAEDFVSSIHKYFP 386


>emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]
          Length = 720

 Score = 70.9 bits (172), Expect(2) = 5e-10
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = -3

Query: 207 LMQQEVKDSKRKEAEMKLKVAVGFCHVIDLLCSEQKLVVGHNCFL 73
           L+ +EVKD  R+EAEMK+K AVGF HVIDLL SEQKL+VGHNC L
Sbjct: 313 LLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLL 357



 Score = 21.2 bits (43), Expect(2) = 5e-10
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 49  TIEEFVSFVNEHFP 8
           T E+FVS ++++FP
Sbjct: 373 TAEDFVSSIHKYFP 386


>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score = 70.9 bits (172), Expect(2) = 5e-10
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = -3

Query: 207 LMQQEVKDSKRKEAEMKLKVAVGFCHVIDLLCSEQKLVVGHNCFL 73
           L+ +EVKD  R+EAEMK+K AVGF HVIDLL SEQKL+VGHNC L
Sbjct: 313 LLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLL 357



 Score = 21.2 bits (43), Expect(2) = 5e-10
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 49  TIEEFVSFVNEHFP 8
           T E+FVS ++++FP
Sbjct: 373 TAEDFVSSIHKYFP 386


>ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus] gi|449524565|ref|XP_004169292.1| PREDICTED:
           poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus]
          Length = 700

 Score = 61.6 bits (148), Expect(2) = 5e-09
 Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 10/72 (13%)
 Frame = -3

Query: 258 LCFLRLING-VDLYLMLV---------LMQQEVKDSKRKEAEMKLKVAVGFCHVIDLLCS 109
           LCF+ + +G  DL  ++V         L+ QEV   +++  EMK++ A+GF HVIDLL S
Sbjct: 288 LCFVVVNDGNADLQQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSS 347

Query: 108 EQKLVVGHNCFL 73
           E+KL+VGHNCFL
Sbjct: 348 EKKLIVGHNCFL 359



 Score = 26.9 bits (58), Expect(2) = 5e-09
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 70  FLALFLSTIEEFVSFVNEHFPSI 2
           F+    ST EEFVS + +HFP I
Sbjct: 368 FIGSLPSTTEEFVSSLGKHFPYI 390