BLASTX nr result

ID: Coptis21_contig00013234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013234
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274601.1| PREDICTED: probable xyloglucan endotransgluc...   184   9e-45
ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransgluc...   183   3e-44
emb|CAN80252.1| hypothetical protein VITISV_036642 [Vitis vinifera]   183   3e-44
ref|XP_003633212.1| PREDICTED: LOW QUALITY PROTEIN: xyloglucan e...   182   3e-44
ref|XP_002270182.1| PREDICTED: probable xyloglucan endotransgluc...   182   3e-44

>ref|XP_002274601.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 297

 Score =  184 bits (468), Expect = 9e-45
 Identities = 89/178 (50%), Positives = 111/178 (62%), Gaps = 8/178 (4%)
 Frame = -1

Query: 606 HDEVDFEFLGNVDGRKYILQTNIFIQNVGAREQKFHLGFDPTMDYHNYSILWNPQGLIFL 427
           HDE+DFEFLGN+ G  YIL TN+F Q  G REQ+F+L FDPT D+H YSILWNPQ +IF 
Sbjct: 104 HDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFS 163

Query: 426 LDGSPIRYYKGSG-------LRQPMSLDATLWDGSDWATSGGKIKVDWTQAPFVASYRNY 268
           +DG+PIR +K S          QPM + ++LW+  DWAT GG IK DWTQAPF ASYRN+
Sbjct: 164 VDGTPIREFKNSESIGVPYLKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNF 223

Query: 267 NVDAC-WXXXXXXXXXXXXXXXXXXXSWMFRKLTIQEQKHLATVRKYFMIYDYCADPK 97
           N DAC W                    W  ++L    Q+ +  V+K +MIY+YC D K
Sbjct: 224 NADACIWSSGASSCSSNTPTSISPSTDWYSQELDSTSQERMKWVQKNYMIYNYCTDTK 281


>ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 345

 Score =  183 bits (464), Expect = 3e-44
 Identities = 87/178 (48%), Positives = 112/178 (62%), Gaps = 8/178 (4%)
 Frame = -1

Query: 606 HDEVDFEFLGNVDGRKYILQTNIFIQNVGAREQKFHLGFDPTMDYHNYSILWNPQGLIFL 427
           HDE+DFEFLGN+ G  YIL TN+F Q  G REQ+F+L FDPT D+H YSILWNPQ +IF 
Sbjct: 104 HDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFS 163

Query: 426 LDGSPIRYYKGS-------GLRQPMSLDATLWDGSDWATSGGKIKVDWTQAPFVASYRNY 268
           +DG+PIR +K S          QPM + ++LW+  DWAT GG +K DW+QAPF ASYRN+
Sbjct: 164 VDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYRNF 223

Query: 267 NVDAC-WXXXXXXXXXXXXXXXXXXXSWMFRKLTIQEQKHLATVRKYFMIYDYCADPK 97
           N DAC W                    W  ++L    Q+ +  V+K +MIY+YC+D K
Sbjct: 224 NADACIWSSGASSCSSNTPTSTSTNTEWYSQELDSTSQERMKWVQKNYMIYNYCSDTK 281


>emb|CAN80252.1| hypothetical protein VITISV_036642 [Vitis vinifera]
          Length = 287

 Score =  183 bits (464), Expect = 3e-44
 Identities = 87/178 (48%), Positives = 112/178 (62%), Gaps = 8/178 (4%)
 Frame = -1

Query: 606 HDEVDFEFLGNVDGRKYILQTNIFIQNVGAREQKFHLGFDPTMDYHNYSILWNPQGLIFL 427
           HDE+DFEFLGN+ G  YIL TN+F Q  G REQ+F+L FDPT D+H YSILWNPQ +IF 
Sbjct: 94  HDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFS 153

Query: 426 LDGSPIRYYKGS-------GLRQPMSLDATLWDGSDWATSGGKIKVDWTQAPFVASYRNY 268
           +DG+PIR +K S          QPM + ++LW+  DWAT GG +K DW+QAPF ASYRN+
Sbjct: 154 VDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYRNF 213

Query: 267 NVDAC-WXXXXXXXXXXXXXXXXXXXSWMFRKLTIQEQKHLATVRKYFMIYDYCADPK 97
           N DAC W                    W  ++L    Q+ +  V+K +MIY+YC+D K
Sbjct: 214 NADACIWSSGASSCSSNTPTSTSTNTEWYSQELDSTSQERMKWVQKNYMIYNYCSDTK 271


>ref|XP_003633212.1| PREDICTED: LOW QUALITY PROTEIN: xyloglucan
           endotransglucosylase/hydrolase protein 22-like [Vitis
           vinifera]
          Length = 296

 Score =  182 bits (463), Expect = 3e-44
 Identities = 87/178 (48%), Positives = 112/178 (62%), Gaps = 8/178 (4%)
 Frame = -1

Query: 606 HDEVDFEFLGNVDGRKYILQTNIFIQNVGAREQKFHLGFDPTMDYHNYSILWNPQGLIFL 427
           HDE+DFEFLGN+ G  YIL TN+F Q  G REQ+F+L FDPT ++H+YSILWNPQ +IF 
Sbjct: 103 HDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTANFHSYSILWNPQRIIFS 162

Query: 426 LDGSPIRYYKGS-------GLRQPMSLDATLWDGSDWATSGGKIKVDWTQAPFVASYRNY 268
           +DG+PIR +K S          QPM + ++LW+  DWAT GG +K DWTQAPF ASYRN+
Sbjct: 163 VDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNF 222

Query: 267 NVDAC-WXXXXXXXXXXXXXXXXXXXSWMFRKLTIQEQKHLATVRKYFMIYDYCADPK 97
           N DAC W                    W  ++L    Q+ +  V+K +MIY+YC D K
Sbjct: 223 NADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERMKWVQKNYMIYNYCTDTK 280


>ref|XP_002270182.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 296

 Score =  182 bits (463), Expect = 3e-44
 Identities = 87/178 (48%), Positives = 111/178 (62%), Gaps = 8/178 (4%)
 Frame = -1

Query: 606 HDEVDFEFLGNVDGRKYILQTNIFIQNVGAREQKFHLGFDPTMDYHNYSILWNPQGLIFL 427
           HDE+DFEFLGN+ G  YIL TN+F Q  G REQ+F+L FDPT D+H YSILWNPQ +IF 
Sbjct: 103 HDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFS 162

Query: 426 LDGSPIRYYKGS-------GLRQPMSLDATLWDGSDWATSGGKIKVDWTQAPFVASYRNY 268
           +DG+PIR +K S          QPM + ++LW+  DWAT GG +K DW+QAPF ASYRN+
Sbjct: 163 VDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYRNF 222

Query: 267 NVDAC-WXXXXXXXXXXXXXXXXXXXSWMFRKLTIQEQKHLATVRKYFMIYDYCADPK 97
           N DAC W                    W  ++L    Q+ +  V+K +MIY+YC D K
Sbjct: 223 NADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERMKWVQKNYMIYNYCTDTK 280


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