BLASTX nr result
ID: Coptis21_contig00013210
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013210 (688 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2... 92 9e-17 emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera] 68 1e-09 emb|CBI26021.3| unnamed protein product [Vitis vinifera] 65 1e-08 ref|XP_003626468.1| F-box/LRR-repeat protein [Medicago truncatul... 64 4e-08 ref|XP_002461442.1| hypothetical protein SORBIDRAFT_02g002773 [S... 63 6e-08 >ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1| predicted protein [Populus trichocarpa] Length = 426 Score = 92.0 bits (227), Expect = 9e-17 Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 4/111 (3%) Frame = +3 Query: 366 ISQMPEDILSF----LTMRDAVKTRVLSPRWRYLSSSTGNVYFDLRTLFGINYDRNYLSK 533 IS++ +DILSF LTM+DAVKTR+LS RWRYLS ++ FD+ TLFG + Sbjct: 5 ISELSDDILSFILSFLTMQDAVKTRLLSHRWRYLSPPLSHLQFDVFTLFGTH-------- 56 Query: 534 NSDSLWEGKYRFINAVDQIMQLYRSPKLYSFKVCYCLGNESASHIDRWISF 686 E +F+ AVDQ++ R PK+ + KV + LG++ A H+DRW+SF Sbjct: 57 -----GESSSKFVTAVDQVLLACRGPKIGTVKVRFGLGDDHAFHVDRWVSF 102 >emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera] Length = 1789 Score = 68.2 bits (165), Expect = 1e-09 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 8/112 (7%) Frame = +3 Query: 372 QMPEDILS----FLTMRDAVKTRVLSPRWRYLSSSTGNVYFDLRTLFGINYDRNYLSKNS 539 ++P+DILS L +++AV+T +LS RWR + + ++FD ++ GI +S N Sbjct: 1322 ELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCSXSMSGNQ 1381 Query: 540 DSL--WEGKYRFINAVDQIMQLYRS--PKLYSFKVCYCLGNESASHIDRWIS 683 L +F+ VDQ M YRS PK+ SF + + LG E SHID+WI+ Sbjct: 1382 PELNSQMQSXKFVERVDQFM-YYRSQGPKINSFSIHFPLGKEFMSHIDQWIT 1432 >emb|CBI26021.3| unnamed protein product [Vitis vinifera] Length = 487 Score = 65.1 bits (157), Expect = 1e-08 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%) Frame = +3 Query: 372 QMPEDILS----FLTMRDAVKTRVLSPRWRYLSSSTGNVYFDLRTLFGINYDRNYLSKNS 539 ++P+DILS L +++AV+T +LS RWR + + ++FD ++ GI +S N Sbjct: 20 ELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCSTSMSGNQ 79 Query: 540 DSL--WEGKYRFINAVDQIMQLYRSP--KLYSFKVCYCLGNESASHIDRWIS 683 L +F+ VDQ M YRS K+ SF + + LG E SHID+WI+ Sbjct: 80 PELNSQMQSSKFVERVDQFM-YYRSQGRKINSFSIHFPLGKEFMSHIDQWIT 130 >ref|XP_003626468.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355501483|gb|AES82686.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 259 Score = 63.5 bits (153), Expect = 4e-08 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 16/123 (13%) Frame = +3 Query: 366 ISQMPEDIL----SFLTMRDAVKTRVLSPRWRYLSSSTGNVYFDLRTLFG---------- 503 IS++P+DIL + L+M+D +K+ +LS RW L S ++YFD+ +FG Sbjct: 5 ISELPDDILCDMLTTLSMKDLLKSSILSKRWSKLWGSRRDLYFDVFNVFGSSEKELQKTG 64 Query: 504 --INYDRNYLSKNSDSLWEGKYRFINAVDQIMQLYRSPKLYSFKVCYCLGNESASHIDRW 677 I+ + L++ K F+ VDQ ++ + + SF V + L E ++ ID+W Sbjct: 65 YLIDVTSRFSVDRCIDLYKTKDEFVKRVDQFVKNFPGTVINSFLVSFYLNCEQSNTIDQW 124 Query: 678 ISF 686 ISF Sbjct: 125 ISF 127 >ref|XP_002461442.1| hypothetical protein SORBIDRAFT_02g002773 [Sorghum bicolor] gi|241924819|gb|EER97963.1| hypothetical protein SORBIDRAFT_02g002773 [Sorghum bicolor] Length = 256 Score = 62.8 bits (151), Expect = 6e-08 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 5/112 (4%) Frame = +3 Query: 366 ISQMPE----DILSFLTMRDAVKTRVLSPRWRYLSSSTGNVYFDLRTLFGINYDRNYLSK 533 IS +P+ +ILS +T+R+A T VLS RWR+L S ++ D+ T FG+ N + Sbjct: 37 ISSLPDGILINILSLMTVREAAVTDVLSTRWRHLWESVDHLILDMHT-FGMQVPPNSDNH 95 Query: 534 -NSDSLWEGKYRFINAVDQIMQLYRSPKLYSFKVCYCLGNESASHIDRWISF 686 N D F+ V++++ ++ KL FKV + L + AS +DRW++F Sbjct: 96 GNLDFSNSEATTFVRKVNELLSHHKGNKLKEFKVEFPLSSAHASELDRWVAF 147