BLASTX nr result
ID: Coptis21_contig00013194
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013194 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 103 1e-20 ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550... 103 2e-20 ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ... 102 2e-20 >ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1| predicted protein [Populus trichocarpa] Length = 364 Score = 107 bits (267), Expect = 1e-21 Identities = 68/139 (48%), Positives = 84/139 (60%), Gaps = 16/139 (11%) Frame = -3 Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNIS---LM 249 MS LPQ+II IL+ LPVKSL++F+CV KPW LI DP FVKLHL +A E NNI+ L+ Sbjct: 1 MSKLPQDIIVDILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNINRQRLL 60 Query: 248 VCDDNENLY-SVDYSTS-----CTEAVEIDYPGKG----SFNGVEIVGSCNGLLCIHT-- 105 V E LY SVD+ + +E+ YP SF I GSC+GL+CI Sbjct: 61 VA--AEPLYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVCIRNGG 118 Query: 104 DFFDV-IWNPCTNEYKKLP 51 D D+ +WNP T E KKLP Sbjct: 119 DVHDMFLWNPSTRESKKLP 137 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 103 bits (258), Expect = 1e-20 Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 6/132 (4%) Frame = -3 Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCD 240 MS LP E+I IL RLP K LL R VSKPWC+LID PNFVKLHL + + ++ ++ Sbjct: 1 MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILR 60 Query: 239 DNENLYSVDYS-----TSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNP 78 +++ +D+ C E+++P +G++++GS NGLLCI D+ +WNP Sbjct: 61 TTSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNP 120 Query: 77 CTNEYKKLPIAP 42 T +++ +P P Sbjct: 121 STRKHRVVPFLP 132 >ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1| predicted protein [Populus trichocarpa] Length = 360 Score = 103 bits (257), Expect = 1e-20 Identities = 62/135 (45%), Positives = 80/135 (59%), Gaps = 13/135 (9%) Frame = -3 Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNIS---LM 249 MS LPQEII IL+ LP KSL+KF+CV + W SLI DP F KLHL +A E+ NI+ L+ Sbjct: 1 MSKLPQEIIVDILTYLPAKSLIKFKCVCRSWRSLISDPQFAKLHLKRAHEDENINRQRLL 60 Query: 248 VCDDNENLYSVDYSTSC-----TEAVEIDYPGKGSFNGVEIV----GSCNGLLCIHTDFF 96 + D LYSVD+ + V++ YP S N V GSC+G++CI + Sbjct: 61 IAAD--PLYSVDFEAASDGDNGNTLVKLSYPNAESHNDSFAVGLFLGSCDGIVCILNEVD 118 Query: 95 DVI-WNPCTNEYKKL 54 V+ WNP T E KKL Sbjct: 119 SVVLWNPSTRESKKL 133 >ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1| F-box protein [Medicago truncatula] Length = 381 Score = 103 bits (256), Expect = 2e-20 Identities = 53/126 (42%), Positives = 81/126 (64%) Frame = -3 Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCD 240 M++LP EI+T ILS LPV+SLL+FR SK SLID +F+KLHL+ + + ++ Sbjct: 1 MTDLPPEILTGILSLLPVQSLLRFRSTSKSLQSLIDSHSFIKLHLHNSFNRS----LILR 56 Query: 239 DNENLYSVDYSTSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDVIWNPCTNEYK 60 N + Y ++ ++ T AV+++ P KGS N + +VGSCNGLLC+ +D WNP +++ Sbjct: 57 HNSDFYQINDFSNLTTAVKLNPPFKGSNNFISLVGSCNGLLCLFSDGEIAFWNPTICKHR 116 Query: 59 KLPIAP 42 +P P Sbjct: 117 IIPSLP 122 >ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 406 Score = 102 bits (255), Expect = 2e-20 Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 11/136 (8%) Frame = -3 Query: 425 TTMSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISL-M 249 T++S LP+++I ILSR+PVK LL+F+CVSK W S+I DP F KL L +A EN+NIS Sbjct: 48 TSISTLPEDLIVEILSRVPVKPLLRFKCVSKSWNSIISDPRFAKLQLKRAKENSNISCNR 107 Query: 248 VCDDNENLYSVDYSTSCTE-----AVEIDYP----GKGSFNGVEIVGSCNGLLCIHTDFF 96 + + S+D+ C + + +P G +F V I+GSC+GL+C+ D+ Sbjct: 108 LLLSTWSPRSLDFEAFCDDDLSNTITNVSFPAIVKGPPTFY-VRILGSCDGLVCLLDDYG 166 Query: 95 DV-IWNPCTNEYKKLP 51 + +WNP T +YK+LP Sbjct: 167 TMFLWNPTTRQYKELP 182