BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013194
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   103   1e-20
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550...   103   2e-20
ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...   102   2e-20

>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score =  107 bits (267), Expect = 1e-21
 Identities = 68/139 (48%), Positives = 84/139 (60%), Gaps = 16/139 (11%)
 Frame = -3

Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNIS---LM 249
           MS LPQ+II  IL+ LPVKSL++F+CV KPW  LI DP FVKLHL +A E NNI+   L+
Sbjct: 1   MSKLPQDIIVDILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNINRQRLL 60

Query: 248 VCDDNENLY-SVDYSTS-----CTEAVEIDYPGKG----SFNGVEIVGSCNGLLCIHT-- 105
           V    E LY SVD+  +         +E+ YP       SF    I GSC+GL+CI    
Sbjct: 61  VA--AEPLYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVCIRNGG 118

Query: 104 DFFDV-IWNPCTNEYKKLP 51
           D  D+ +WNP T E KKLP
Sbjct: 119 DVHDMFLWNPSTRESKKLP 137


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
 Frame = -3

Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCD 240
           MS LP E+I  IL RLP K LL  R VSKPWC+LID PNFVKLHL  + + ++   ++  
Sbjct: 1   MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILR 60

Query: 239 DNENLYSVDYS-----TSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNP 78
              +++ +D+        C    E+++P     +G++++GS NGLLCI     D+ +WNP
Sbjct: 61  TTSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNP 120

Query: 77  CTNEYKKLPIAP 42
            T +++ +P  P
Sbjct: 121 STRKHRVVPFLP 132


>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/135 (45%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
 Frame = -3

Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNIS---LM 249
           MS LPQEII  IL+ LP KSL+KF+CV + W SLI DP F KLHL +A E+ NI+   L+
Sbjct: 1   MSKLPQEIIVDILTYLPAKSLIKFKCVCRSWRSLISDPQFAKLHLKRAHEDENINRQRLL 60

Query: 248 VCDDNENLYSVDYSTSC-----TEAVEIDYPGKGSFNGVEIV----GSCNGLLCIHTDFF 96
           +  D   LYSVD+  +         V++ YP   S N    V    GSC+G++CI  +  
Sbjct: 61  IAAD--PLYSVDFEAASDGDNGNTLVKLSYPNAESHNDSFAVGLFLGSCDGIVCILNEVD 118

Query: 95  DVI-WNPCTNEYKKL 54
            V+ WNP T E KKL
Sbjct: 119 SVVLWNPSTRESKKL 133


>ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/126 (42%), Positives = 81/126 (64%)
 Frame = -3

Query: 419 MSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCD 240
           M++LP EI+T ILS LPV+SLL+FR  SK   SLID  +F+KLHL+ +   +    ++  
Sbjct: 1   MTDLPPEILTGILSLLPVQSLLRFRSTSKSLQSLIDSHSFIKLHLHNSFNRS----LILR 56

Query: 239 DNENLYSVDYSTSCTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDVIWNPCTNEYK 60
            N + Y ++  ++ T AV+++ P KGS N + +VGSCNGLLC+ +D     WNP   +++
Sbjct: 57  HNSDFYQINDFSNLTTAVKLNPPFKGSNNFISLVGSCNGLLCLFSDGEIAFWNPTICKHR 116

Query: 59  KLPIAP 42
            +P  P
Sbjct: 117 IIPSLP 122


>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 11/136 (8%)
 Frame = -3

Query: 425 TTMSNLPQEIITSILSRLPVKSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISL-M 249
           T++S LP+++I  ILSR+PVK LL+F+CVSK W S+I DP F KL L +A EN+NIS   
Sbjct: 48  TSISTLPEDLIVEILSRVPVKPLLRFKCVSKSWNSIISDPRFAKLQLKRAKENSNISCNR 107

Query: 248 VCDDNENLYSVDYSTSCTE-----AVEIDYP----GKGSFNGVEIVGSCNGLLCIHTDFF 96
           +     +  S+D+   C +        + +P    G  +F  V I+GSC+GL+C+  D+ 
Sbjct: 108 LLLSTWSPRSLDFEAFCDDDLSNTITNVSFPAIVKGPPTFY-VRILGSCDGLVCLLDDYG 166

Query: 95  DV-IWNPCTNEYKKLP 51
            + +WNP T +YK+LP
Sbjct: 167 TMFLWNPTTRQYKELP 182