BLASTX nr result
ID: Coptis21_contig00013193
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013193 (790 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2... 416 e-114 ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2... 409 e-112 ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2... 406 e-111 ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti... 402 e-110 emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera] 402 e-110 >ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1| predicted protein [Populus trichocarpa] Length = 489 Score = 416 bits (1069), Expect = e-114 Identities = 201/254 (79%), Positives = 229/254 (90%) Frame = -3 Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609 HETYI NSFLGQHITAGGDP E+NFSG AINLMGNDNAVTDVVIFS AIGVM+SGQANTL Sbjct: 235 HETYIRNSFLGQHITAGGDPGERNFSGTAINLMGNDNAVTDVVIFSAAIGVMISGQANTL 294 Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429 SGVHCYNKATG+GGTGIYL+LP LTQTRI+NCY+DY+GIVAEDPVQL ISSSFFLGDA+I Sbjct: 295 SGVHCYNKATGFGGTGIYLKLPSLTQTRILNCYLDYSGIVAEDPVQLTISSSFFLGDAYI 354 Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249 LFKS+KG+ G+N+VDNMFSGS KGI IVQLDQSKG F ++QVV+DRNNV GM L+ATV Sbjct: 355 LFKSVKGLAKGINIVDNMFSGSNKGIEIVQLDQSKGPFKQIDQVVVDRNNVNGMNLKATV 414 Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69 A+G QGNGTSWT+DF+PVLLFPNLI H QY++S S T FP+HALRNVS NRVV+ESD+ Sbjct: 415 AKGSVQGNGTSWTIDFSPVLLFPNLIDHVQYSVSSSGT-LFPSHALRNVSENRVVIESDV 473 Query: 68 AVPATVYVAVDQGM 27 AVPA+V+V V+QG+ Sbjct: 474 AVPASVFVTVNQGV 487 >ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|224137804|ref|XP_002326444.1| predicted protein [Populus trichocarpa] gi|222832896|gb|EEE71373.1| predicted protein [Populus trichocarpa] gi|222833766|gb|EEE72243.1| predicted protein [Populus trichocarpa] Length = 496 Score = 409 bits (1050), Expect = e-112 Identities = 202/253 (79%), Positives = 222/253 (87%) Frame = -3 Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609 HETYI NSFLGQHITAGGDP E+ FSG AINLMGNDNAVTDVVIFS AIGVMVSGQANTL Sbjct: 242 HETYIRNSFLGQHITAGGDPGERKFSGTAINLMGNDNAVTDVVIFSAAIGVMVSGQANTL 301 Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429 SGVHCYNKATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQL ISS FFLGDA+I Sbjct: 302 SGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLTISSCFFLGDAYI 361 Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249 L KSI G+ G+N+VDNMF+GS KGI IVQLDQSKG F ++QVV+DRNNV+GM L+AT Sbjct: 362 LLKSINGLAKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATA 421 Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69 ARG QGNGTSWTVDF+PVLLFPNLI H QY+LS S T FP+HALRNVS NRVV+ESDI Sbjct: 422 ARGSAQGNGTSWTVDFSPVLLFPNLINHVQYSLSSSGT-KFPSHALRNVSQNRVVIESDI 480 Query: 68 AVPATVYVAVDQG 30 AV A V+V V+QG Sbjct: 481 AVAARVFVTVEQG 493 >ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1| predicted protein [Populus trichocarpa] Length = 336 Score = 406 bits (1043), Expect = e-111 Identities = 201/253 (79%), Positives = 221/253 (87%) Frame = -3 Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609 HETYI NSFLGQHITAGGDP E+ FSG AINLMGNDNAVTDVVIFS AIGVMVSGQANTL Sbjct: 82 HETYIRNSFLGQHITAGGDPGERKFSGTAINLMGNDNAVTDVVIFSAAIGVMVSGQANTL 141 Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429 SGVHCYN ATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQL ISS FFLGDA+I Sbjct: 142 SGVHCYNLATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLTISSCFFLGDAYI 201 Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249 L KSI G+ G+N+VDNMF+GS KGI IVQLDQSKG F ++QVV+DRNNV+GM L+AT Sbjct: 202 LLKSINGLAKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATA 261 Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69 ARG QGNGTSWTVDF+PVLLFPNLI H QY+LS S T FP+HALRNVS NRVV+ESDI Sbjct: 262 ARGSAQGNGTSWTVDFSPVLLFPNLINHVQYSLSSSGT-KFPSHALRNVSQNRVVIESDI 320 Query: 68 AVPATVYVAVDQG 30 AV A V+V V+QG Sbjct: 321 AVAARVFVTVEQG 333 >ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera] Length = 505 Score = 402 bits (1034), Expect = e-110 Identities = 190/252 (75%), Positives = 222/252 (88%) Frame = -3 Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609 HET +H+SFLGQHITAGGDP E++FSG AIN++GNDNA+TDVVI+S A+GVMVSGQANTL Sbjct: 254 HETLVHSSFLGQHITAGGDPGERSFSGTAINIVGNDNAITDVVIYSAAVGVMVSGQANTL 313 Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429 SGVHCYNKATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQLHISSSFFLGDA+I Sbjct: 314 SGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAYI 373 Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249 +FKSI G+ GV+VV NMFSGSGKG+ IVQLDQ G F ++QVV+D NNV GM +RATV Sbjct: 374 VFKSINGVARGVSVVGNMFSGSGKGVEIVQLDQKNGPFKEIDQVVVDGNNVNGMKVRATV 433 Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69 R TQGNGTSW++DFNP+LLFPN IRH QY+L + +FP HALRNVSGNRVV+ES++ Sbjct: 434 GRDSTQGNGTSWSIDFNPILLFPNHIRHVQYSLLTTAGSSFPLHALRNVSGNRVVIESNV 493 Query: 68 AVPATVYVAVDQ 33 AVPA+V+V VDQ Sbjct: 494 AVPASVFVTVDQ 505 >emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera] Length = 448 Score = 402 bits (1033), Expect = e-110 Identities = 190/252 (75%), Positives = 222/252 (88%) Frame = -3 Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609 HET +H+SFLGQHITAGGDP E++FSG AIN++GNDNA+TDVVI+S A+GVMVSGQANTL Sbjct: 197 HETLVHSSFLGQHITAGGDPGERSFSGTAINIVGNDNAITDVVIYSAAVGVMVSGQANTL 256 Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429 SGVHCYNKATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQLHISSSFFLGDA+I Sbjct: 257 SGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAYI 316 Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249 +FKSI G+ GV+VV NMFSGSGKG+ IVQLDQ G F ++QVV+D NNV GM +RATV Sbjct: 317 VFKSINGVARGVSVVGNMFSGSGKGVEIVQLDQKNGPFKEIDQVVVDGNNVNGMKVRATV 376 Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69 R TQGNGTSW++DFNP+LLFPN IRH QY+L + +FP HALRNVSGNRVV+ES++ Sbjct: 377 GRDSTQGNGTSWSIDFNPILLFPNHIRHVQYSLLTTXGSSFPLHALRNVSGNRVVIESNV 436 Query: 68 AVPATVYVAVDQ 33 AVPA+V+V VDQ Sbjct: 437 AVPASVFVTVDQ 448