BLASTX nr result

ID: Coptis21_contig00013193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013193
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti...   402   e-110
emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera]   402   e-110

>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  416 bits (1069), Expect = e-114
 Identities = 201/254 (79%), Positives = 229/254 (90%)
 Frame = -3

Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609
           HETYI NSFLGQHITAGGDP E+NFSG AINLMGNDNAVTDVVIFS AIGVM+SGQANTL
Sbjct: 235 HETYIRNSFLGQHITAGGDPGERNFSGTAINLMGNDNAVTDVVIFSAAIGVMISGQANTL 294

Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429
           SGVHCYNKATG+GGTGIYL+LP LTQTRI+NCY+DY+GIVAEDPVQL ISSSFFLGDA+I
Sbjct: 295 SGVHCYNKATGFGGTGIYLKLPSLTQTRILNCYLDYSGIVAEDPVQLTISSSFFLGDAYI 354

Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249
           LFKS+KG+  G+N+VDNMFSGS KGI IVQLDQSKG F  ++QVV+DRNNV GM L+ATV
Sbjct: 355 LFKSVKGLAKGINIVDNMFSGSNKGIEIVQLDQSKGPFKQIDQVVVDRNNVNGMNLKATV 414

Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69
           A+G  QGNGTSWT+DF+PVLLFPNLI H QY++S S T  FP+HALRNVS NRVV+ESD+
Sbjct: 415 AKGSVQGNGTSWTIDFSPVLLFPNLIDHVQYSVSSSGT-LFPSHALRNVSENRVVIESDV 473

Query: 68  AVPATVYVAVDQGM 27
           AVPA+V+V V+QG+
Sbjct: 474 AVPASVFVTVNQGV 487


>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
           predicted protein [Populus trichocarpa]
           gi|222833766|gb|EEE72243.1| predicted protein [Populus
           trichocarpa]
          Length = 496

 Score =  409 bits (1050), Expect = e-112
 Identities = 202/253 (79%), Positives = 222/253 (87%)
 Frame = -3

Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609
           HETYI NSFLGQHITAGGDP E+ FSG AINLMGNDNAVTDVVIFS AIGVMVSGQANTL
Sbjct: 242 HETYIRNSFLGQHITAGGDPGERKFSGTAINLMGNDNAVTDVVIFSAAIGVMVSGQANTL 301

Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429
           SGVHCYNKATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQL ISS FFLGDA+I
Sbjct: 302 SGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLTISSCFFLGDAYI 361

Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249
           L KSI G+  G+N+VDNMF+GS KGI IVQLDQSKG F  ++QVV+DRNNV+GM L+AT 
Sbjct: 362 LLKSINGLAKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATA 421

Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69
           ARG  QGNGTSWTVDF+PVLLFPNLI H QY+LS S T  FP+HALRNVS NRVV+ESDI
Sbjct: 422 ARGSAQGNGTSWTVDFSPVLLFPNLINHVQYSLSSSGT-KFPSHALRNVSQNRVVIESDI 480

Query: 68  AVPATVYVAVDQG 30
           AV A V+V V+QG
Sbjct: 481 AVAARVFVTVEQG 493


>ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  406 bits (1043), Expect = e-111
 Identities = 201/253 (79%), Positives = 221/253 (87%)
 Frame = -3

Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609
           HETYI NSFLGQHITAGGDP E+ FSG AINLMGNDNAVTDVVIFS AIGVMVSGQANTL
Sbjct: 82  HETYIRNSFLGQHITAGGDPGERKFSGTAINLMGNDNAVTDVVIFSAAIGVMVSGQANTL 141

Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429
           SGVHCYN ATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQL ISS FFLGDA+I
Sbjct: 142 SGVHCYNLATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLTISSCFFLGDAYI 201

Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249
           L KSI G+  G+N+VDNMF+GS KGI IVQLDQSKG F  ++QVV+DRNNV+GM L+AT 
Sbjct: 202 LLKSINGLAKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATA 261

Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69
           ARG  QGNGTSWTVDF+PVLLFPNLI H QY+LS S T  FP+HALRNVS NRVV+ESDI
Sbjct: 262 ARGSAQGNGTSWTVDFSPVLLFPNLINHVQYSLSSSGT-KFPSHALRNVSQNRVVIESDI 320

Query: 68  AVPATVYVAVDQG 30
           AV A V+V V+QG
Sbjct: 321 AVAARVFVTVEQG 333


>ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera]
          Length = 505

 Score =  402 bits (1034), Expect = e-110
 Identities = 190/252 (75%), Positives = 222/252 (88%)
 Frame = -3

Query: 788  HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609
            HET +H+SFLGQHITAGGDP E++FSG AIN++GNDNA+TDVVI+S A+GVMVSGQANTL
Sbjct: 254  HETLVHSSFLGQHITAGGDPGERSFSGTAINIVGNDNAITDVVIYSAAVGVMVSGQANTL 313

Query: 608  SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429
            SGVHCYNKATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQLHISSSFFLGDA+I
Sbjct: 314  SGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAYI 373

Query: 428  LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249
            +FKSI G+  GV+VV NMFSGSGKG+ IVQLDQ  G F  ++QVV+D NNV GM +RATV
Sbjct: 374  VFKSINGVARGVSVVGNMFSGSGKGVEIVQLDQKNGPFKEIDQVVVDGNNVNGMKVRATV 433

Query: 248  ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69
             R  TQGNGTSW++DFNP+LLFPN IRH QY+L  +   +FP HALRNVSGNRVV+ES++
Sbjct: 434  GRDSTQGNGTSWSIDFNPILLFPNHIRHVQYSLLTTAGSSFPLHALRNVSGNRVVIESNV 493

Query: 68   AVPATVYVAVDQ 33
            AVPA+V+V VDQ
Sbjct: 494  AVPASVFVTVDQ 505


>emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera]
          Length = 448

 Score =  402 bits (1033), Expect = e-110
 Identities = 190/252 (75%), Positives = 222/252 (88%)
 Frame = -3

Query: 788 HETYIHNSFLGQHITAGGDPNEKNFSGIAINLMGNDNAVTDVVIFSGAIGVMVSGQANTL 609
           HET +H+SFLGQHITAGGDP E++FSG AIN++GNDNA+TDVVI+S A+GVMVSGQANTL
Sbjct: 197 HETLVHSSFLGQHITAGGDPGERSFSGTAINIVGNDNAITDVVIYSAAVGVMVSGQANTL 256

Query: 608 SGVHCYNKATGWGGTGIYLQLPGLTQTRIVNCYMDYTGIVAEDPVQLHISSSFFLGDAFI 429
           SGVHCYNKATG+GGTGIYL+LP LTQTRIVNCY+DYTGIVAEDPVQLHISSSFFLGDA+I
Sbjct: 257 SGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAYI 316

Query: 428 LFKSIKGIINGVNVVDNMFSGSGKGINIVQLDQSKGAFTTVNQVVIDRNNVQGMTLRATV 249
           +FKSI G+  GV+VV NMFSGSGKG+ IVQLDQ  G F  ++QVV+D NNV GM +RATV
Sbjct: 317 VFKSINGVARGVSVVGNMFSGSGKGVEIVQLDQKNGPFKEIDQVVVDGNNVNGMKVRATV 376

Query: 248 ARGLTQGNGTSWTVDFNPVLLFPNLIRHAQYALSPSTTGTFPNHALRNVSGNRVVVESDI 69
            R  TQGNGTSW++DFNP+LLFPN IRH QY+L  +   +FP HALRNVSGNRVV+ES++
Sbjct: 377 GRDSTQGNGTSWSIDFNPILLFPNHIRHVQYSLLTTXGSSFPLHALRNVSGNRVVIESNV 436

Query: 68  AVPATVYVAVDQ 33
           AVPA+V+V VDQ
Sbjct: 437 AVPASVFVTVDQ 448


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