BLASTX nr result
ID: Coptis21_contig00013180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00013180
(1739 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 351 e-126
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 353 e-124
gb|ACB28472.1| polyprotein [Ananas comosus] 346 e-123
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209... 333 e-121
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216... 339 e-120
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 351 bits (901), Expect(4) = e-126
Identities = 168/272 (61%), Positives = 211/272 (77%)
Frame = -2
Query: 1738 QILVDPDDISKTAFRTHDGHYEFLVMPFGLSNAPATFQSLMNDLFRPYLRKFVLVFFDDI 1559
Q+ V +DI KTAFRTH+ HYE+LVMPFGL NAP+TFQSLMND+FR LRKFVLVFFDDI
Sbjct: 479 QVRVKEEDIHKTAFRTHEDHYEYLVMPFGLMNAPSTFQSLMNDVFRLLLRKFVLVFFDDI 538
Query: 1558 LVYSASISDHLRHLSIVFGILRTNKLFLKESKCSFAQPSICYLGHIISASGVSVDTDKII 1379
LVYS H+ H+ V I++T+ L + KC F Q ++ YLGH+IS GV+VD K++
Sbjct: 539 LVYSQDWKTHMEHVEEVLRIMQTHGLVANKKKCYFGQETVEYLGHLISKEGVAVDPSKVV 598
Query: 1378 SVVEWPIPSSLKGLRGFLGLTRYYRKFVKDDYGKIAAPLTQLLKKNSFVWNDAATNAFSQ 1199
SV WPIP ++KG+RGFLGLT YYRKF+K DYGKIA PLT+L KK++F+WN+ +AF Q
Sbjct: 599 SVTRWPIPKNVKGVRGFLGLTDYYRKFIK-DYGKIAKPLTELTKKDAFMWNEKTQDAFDQ 657
Query: 1198 LKSALTTTPVLALPDFSKEFCIESDASGTGLGAVLMQGGRPIAYFSKALSGKNLNLSVYD 1019
LK LTT+PVLALPDF+KEF IE DASG G+GA+LMQ +P+AY+SKAL +NL S Y+
Sbjct: 658 LKRRLTTSPVLALPDFNKEFVIECDASGGGIGAILMQDRKPVAYYSKALGVRNLTKSAYE 717
Query: 1018 KEMLAIVSVVQKWRPYLMGRHFEVLTDHRSLK 923
KE++A+V +Q WRPYL+GR F V TD +SLK
Sbjct: 718 KELMAVVLAIQHWRPYLLGRRFVVSTDQKSLK 749
Score = 73.6 bits (179), Expect(4) = e-126
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = -1
Query: 611 LLHEFHGTPIGGHSGFLRTYQRLKQNFYWPGMKGAVKSYIARCDVCQCNKAETISP 444
LL EFH TP GGHSGF RTY+RL N YW GMK V+ Y+ CD CQ K SP
Sbjct: 865 LLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSP 920
Score = 52.4 bits (124), Expect(4) = e-126
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = -3
Query: 906 QQKWLSKLLGHDYEILYRPGHDNQAADALSRV-SDCSSIHAISSPIFLGINEIIQECNSN 730
QQ W +KLLG+D+EI+Y+PG N+ ADALSRV D I+S + + +E + +
Sbjct: 761 QQNWAAKLLGYDFEIIYKPGKLNKGADALSRVREDGELCQGITSVQWKDEKLLREELSRD 820
Query: 729 VSIRAIISGLXXXXXXXXXXXYVDSVLRYKG 637
++ II L VL Y+G
Sbjct: 821 SQLQKIIGDLQRDASSRPGYMLKQGVLLYEG 851
Score = 45.1 bits (105), Expect(4) = e-126
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = -2
Query: 448 LHPLPIPDDVWLDLSMDFIDGLPASNRKTTILV 350
L PLP+PD +W DLSMDFI GLP S +LV
Sbjct: 924 LQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLV 956
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 353 bits (905), Expect(4) = e-124
Identities = 173/272 (63%), Positives = 211/272 (77%)
Frame = -2
Query: 1738 QILVDPDDISKTAFRTHDGHYEFLVMPFGLSNAPATFQSLMNDLFRPYLRKFVLVFFDDI 1559
QI V P+DI KTAFRTH+GHYEFLV+PFGL+NAP TFQSLMND+F+PYLRKF+LVFF DI
Sbjct: 661 QIRVHPEDIPKTAFRTHEGHYEFLVIPFGLTNAPTTFQSLMNDIFKPYLRKFILVFFYDI 720
Query: 1558 LVYSASISDHLRHLSIVFGILRTNKLFLKESKCSFAQPSICYLGHIISASGVSVDTDKII 1379
LVYS S++DH+ HL V IL+ ++LF K+SKC F I YLGH+IS GV D KI
Sbjct: 721 LVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLISKDGVQADPTKIE 780
Query: 1378 SVVEWPIPSSLKGLRGFLGLTRYYRKFVKDDYGKIAAPLTQLLKKNSFVWNDAATNAFSQ 1199
+++ WP P+SLK LRGFLGLT YYRKF+K YG IAAPLT LLKKNSF W ++A AF
Sbjct: 781 AMLNWPFPTSLKSLRGFLGLTGYYRKFIK-GYGLIAAPLTALLKKNSFKWTESAKRAFQD 839
Query: 1198 LKSALTTTPVLALPDFSKEFCIESDASGTGLGAVLMQGGRPIAYFSKALSGKNLNLSVYD 1019
LK +T+ PVLALPDFS F I+ DASG G+GAVLMQ GRP+AY S+A+ GK L LS Y+
Sbjct: 840 LKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIHGKALQLSTYE 899
Query: 1018 KEMLAIVSVVQKWRPYLMGRHFEVLTDHRSLK 923
KE++A+V V+KWR YL+G +F++ TD SLK
Sbjct: 900 KELMALVLAVKKWRSYLLGHNFKIQTDQXSLK 931
Score = 70.5 bits (171), Expect(4) = e-124
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -1
Query: 614 QLLHEFHGTPIGGHSGFLRTYQRLKQNFYWPGMKGAVKSYIARCDVCQCNKAETISP 444
Q+L+ H +P GGHSGF +T R K FYW GM+ V+ +I CD+CQ NK+E I P
Sbjct: 1048 QILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHP 1104
Score = 49.7 bits (117), Expect(4) = e-124
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -3
Query: 906 QQKWLSKLLGHDYEILYRPGHDNQAADALSRVSDC---SSIHAISSPIFLGINEIIQECN 736
QQKW++KLLG+++ + Y+ G +N+ ADALSR + ++AI++P + ++
Sbjct: 943 QQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYA 1002
Query: 735 SNVSIRAIISGLXXXXXXXXXXXYVDSVLRYKG 637
+ ++ II L D +L YKG
Sbjct: 1003 IDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKG 1035
Score = 44.7 bits (104), Expect(4) = e-124
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -2
Query: 448 LHPLPIPDDVWLDLSMDFIDGLPASNRKTTILV 350
L PLPIP VW D+S+DFI+GLP S + I+V
Sbjct: 1108 LQPLPIPTKVWTDISLDFIEGLPNSESYSVIMV 1140
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 346 bits (887), Expect(4) = e-123
Identities = 166/272 (61%), Positives = 210/272 (77%)
Frame = -2
Query: 1738 QILVDPDDISKTAFRTHDGHYEFLVMPFGLSNAPATFQSLMNDLFRPYLRKFVLVFFDDI 1559
QI + DDISKTAFRTH+GHYEFLVMPFGL+NAP+TFQ LMN +F+PYLR+F+LVFFDDI
Sbjct: 326 QIRMHADDISKTAFRTHEGHYEFLVMPFGLTNAPSTFQGLMNHIFKPYLRRFILVFFDDI 385
Query: 1558 LVYSASISDHLRHLSIVFGILRTNKLFLKESKCSFAQPSICYLGHIISASGVSVDTDKII 1379
LVYS + +HL HL F +LR + LF++ KC FA + YLGH+IS GVS+D K+
Sbjct: 386 LVYSKGVEEHLCHLRTTFQVLRQHSLFVRRKKCIFAAVQLEYLGHVISHEGVSMDKKKVE 445
Query: 1378 SVVEWPIPSSLKGLRGFLGLTRYYRKFVKDDYGKIAAPLTQLLKKNSFVWNDAATNAFSQ 1199
++ EWP+P++ K LRGFLGL YYR+FVK D+GKI+ L ++L K F W + AF Q
Sbjct: 446 AIQEWPLPTTAKELRGFLGLAGYYRRFVK-DFGKISKSLHEMLGKEGFKWTNERHYAFQQ 504
Query: 1198 LKSALTTTPVLALPDFSKEFCIESDASGTGLGAVLMQGGRPIAYFSKALSGKNLNLSVYD 1019
LK A++ PVLALPDF+ +F IE+DASG G+GAVL+Q GRPIA+ SK LS +N LS Y+
Sbjct: 505 LKKAVSAAPVLALPDFTIDFTIETDASGIGVGAVLLQKGRPIAFMSKPLSPRNRQLSTYE 564
Query: 1018 KEMLAIVSVVQKWRPYLMGRHFEVLTDHRSLK 923
+EMLAIV VQKWRPYL+GRHF++ TDH+SLK
Sbjct: 565 REMLAIVIAVQKWRPYLIGRHFKIKTDHQSLK 596
Score = 68.2 bits (165), Expect(4) = e-123
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -1
Query: 614 QLLHEFHGTPIGGHSGFLRTYQRLKQNFYWPGMKGAVKSYIARCDVCQCNKAETISP 444
QL+H FH + IGGHSG T ++LK FYW G++ V+ ++ C VCQ NK ET +P
Sbjct: 707 QLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYETTAP 763
Score = 53.1 bits (126), Expect(4) = e-123
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = -3
Query: 906 QQKWLSKLLGHDYEILYRPGHDNQAADALSRVSDCSSIHAISSPIFLGINEIIQECNSNV 727
QQKW++KL+G+DYE++Y+ G +N ADALSR ++ AI + + +++I N +
Sbjct: 608 QQKWVAKLMGYDYELIYKKGQENVVADALSRSPTLLAVSAIHTDL---LDQIKWSWNVDD 664
Query: 726 SIRAIISGLXXXXXXXXXXXYVDSVLRYKG 637
++ II +V LR KG
Sbjct: 665 KLKKIIQQKQSDINSWPRYTWVQDQLRRKG 694
Score = 46.6 bits (109), Expect(4) = e-123
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -2
Query: 448 LHPLPIPDDVWLDLSMDFIDGLPASNRKTTILV 350
L PLPIP+ +W ++SMDFI+GLP S K I+V
Sbjct: 767 LQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMV 799
>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
Length = 1503
Score = 333 bits (854), Expect(4) = e-121
Identities = 162/272 (59%), Positives = 208/272 (76%)
Frame = -2
Query: 1738 QILVDPDDISKTAFRTHDGHYEFLVMPFGLSNAPATFQSLMNDLFRPYLRKFVLVFFDDI 1559
QI + +D+ KTAF TH+GHYEFLVMPFGL+NAPATFQSLMN++F+P LR+ VLVFF DI
Sbjct: 938 QIRMREEDVEKTAFHTHEGHYEFLVMPFGLTNAPATFQSLMNEVFKPILRRCVLVFFYDI 997
Query: 1558 LVYSASISDHLRHLSIVFGILRTNKLFLKESKCSFAQPSICYLGHIISASGVSVDTDKII 1379
LVYS I +H++HL +VF ILR ++LF SK A + YLGH+IS+ GV D DKI
Sbjct: 998 LVYSVDIDEHMKHLGMVFAILRDHELFANRSKFVIAHSQVQYLGHLISSRGVEADEDKIR 1057
Query: 1378 SVVEWPIPSSLKGLRGFLGLTRYYRKFVKDDYGKIAAPLTQLLKKNSFVWNDAATNAFSQ 1199
S+V WP P + GLRGFLGLT YYR+FVK YG++A PLT+LL+KNSF+W + AT AF +
Sbjct: 1058 SMVNWPQPKDVTGLRGFLGLTGYYRRFVK-GYGEMAEPLTKLLQKNSFLWGEEATEAFDK 1116
Query: 1198 LKSALTTTPVLALPDFSKEFCIESDASGTGLGAVLMQGGRPIAYFSKALSGKNLNLSVYD 1019
LK A+TT PVLALPD++ F IE+DASG LGAVL Q G PIA+FS+ LS + S+Y+
Sbjct: 1117 LKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQKLSNRAKTKSIYE 1176
Query: 1018 KEMLAIVSVVQKWRPYLMGRHFEVLTDHRSLK 923
+E++A+V VQKWR YL+GR F +++D R+LK
Sbjct: 1177 RELMAVVLSVQKWRHYLLGRKFTIISDQRALK 1208
Score = 75.5 bits (184), Expect(4) = e-121
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = -1
Query: 611 LLHEFHGTPIGGHSGFLRTYQRLKQNFYWPGMKGAVKSYIARCDVCQCNKAETISP 444
LLH FH + +GGHSGFLRTY+R+ YW GMK VK Y+ C+VCQ NK E P
Sbjct: 1323 LLHTFHDSILGGHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKP 1378
Score = 60.5 bits (145), Expect(4) = e-121
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = -3
Query: 903 QKWLSKLLGHDYEILYRPGHDNQAADALSRVSDCSSIHAISSPIFLGINEIIQECNSNVS 724
QKWL+KLLG+D+EILY+PG N+AADALSR+ + +S+ + + + +E +
Sbjct: 1221 QKWLTKLLGYDFEILYQPGLQNKAADALSRIEQPVEMKNMSTTGIVNMEVVEKEVELDEE 1280
Query: 723 IRAIISGLXXXXXXXXXXXYVDSVLRYK 640
++AII L +V+ L YK
Sbjct: 1281 LKAIIEELKQNPDEPSKFQWVNGNLWYK 1308
Score = 37.0 bits (84), Expect(4) = e-121
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 448 LHPLPIPDDVWLDLSMDFIDGLPASNRKTTILV 350
L P+PIP+ + D SMDFI+GLP + I+V
Sbjct: 1382 LQPIPIPERILEDWSMDFIEGLPKAGGMNVIMV 1414
>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 339 bits (869), Expect(4) = e-120
Identities = 164/272 (60%), Positives = 209/272 (76%)
Frame = -2
Query: 1738 QILVDPDDISKTAFRTHDGHYEFLVMPFGLSNAPATFQSLMNDLFRPYLRKFVLVFFDDI 1559
QI + DI KTAFRTH+GHYEFLVMPFGL+NAP+TFQSLMN +F+PYLRKF+LVFFDDI
Sbjct: 1635 QIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDI 1694
Query: 1558 LVYSASISDHLRHLSIVFGILRTNKLFLKESKCSFAQPSICYLGHIISASGVSVDTDKII 1379
L+YS ++ HL HL + ILR N+L+ KCSFAQ + YLGHIISA GV VD +KI
Sbjct: 1695 LIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIR 1754
Query: 1378 SVVEWPIPSSLKGLRGFLGLTRYYRKFVKDDYGKIAAPLTQLLKKNSFVWNDAATNAFSQ 1199
++ EWP P++++ +RGFLGLT YYRKFV+ YG +AAPLTQL+KK F W D + AF +
Sbjct: 1755 AIKEWPTPTNIREVRGFLGLTGYYRKFVQ-HYGSMAAPLTQLVKKGGFNWTDDSEEAFQR 1813
Query: 1198 LKSALTTTPVLALPDFSKEFCIESDASGTGLGAVLMQGGRPIAYFSKALSGKNLNLSVYD 1019
L+ A+ T PVLALPDFS F +E+DASG G+GAVLMQ +PIAYFS L+ ++ VY+
Sbjct: 1814 LQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAYFSHTLAVRDRVKPVYE 1873
Query: 1018 KEMLAIVSVVQKWRPYLMGRHFEVLTDHRSLK 923
+E++A+V VQ+WRPYL+G+ F V TD +SLK
Sbjct: 1874 RELMAVVMAVQRWRPYLLGKPFIVRTDQKSLK 1905
Score = 66.6 bits (161), Expect(4) = e-120
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = -1
Query: 632 TSSWCSQLLHEFHGTPIGGHSGFLRTYQRLKQNFYWPGMKGAVKSYIARCDVCQCNKAET 453
+S+ +L+ +H + IGGHSGFLRTY+R+ YW GMK +K Y C +CQ NK+
Sbjct: 2014 SSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLA 2073
Query: 452 ISP 444
++P
Sbjct: 2074 LTP 2076
Score = 58.2 bits (139), Expect(4) = e-120
Identities = 23/64 (35%), Positives = 44/64 (68%)
Frame = -3
Query: 903 QKWLSKLLGHDYEILYRPGHDNQAADALSRVSDCSSIHAISSPIFLGINEIIQECNSNVS 724
QKW++KLLG+ +E+ Y+PG +N+AADALSRV + ++++P + + + +E ++
Sbjct: 1918 QKWVAKLLGYSFEVQYKPGLENKAADALSRVPPAVQLSSLTAPALIDLLVVKKEVEEDIR 1977
Query: 723 IRAI 712
+R +
Sbjct: 1978 LRKV 1981
Score = 40.0 bits (92), Expect(4) = e-120
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = -2
Query: 448 LHPLPIPDDVWLDLSMDFIDGLPASNRKTTILV 350
L PL +P ++W D+SMDFI+GLP S TI V
Sbjct: 2080 LLPLEVPTNIWSDISMDFIEGLPKSCGFETIFV 2112