BLASTX nr result

ID: Coptis21_contig00013168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013168
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568922.1| Pyridoxal biosynthesis protein PDX2 [Arabidopsi...   343   4e-92
ref|XP_002866384.1| ATPDX2/EMB2407/PDX2 [Arabidopsis lyrata subs...   341   2e-91
gb|ADZ47881.1| pyridoxial biosynthesis 2 [Arabidopsis thaliana]       335   9e-90
ref|XP_002285095.1| PREDICTED: pyridoxal biosynthesis protein PD...   335   1e-89
dbj|BAB08237.1| amidotransferase hisH-like protein [Arabidopsis ...   332   1e-88

>ref|NP_568922.1| Pyridoxal biosynthesis protein PDX2 [Arabidopsis thaliana]
           gi|75154761|sp|Q8LAD0.1|PDX2_ARATH RecName:
           Full=Pyridoxal biosynthesis protein PDX2; AltName:
           Full=Probable glutamine amidotransferase; Short=AtPDX2;
           AltName: Full=Protein EMBRYO DEFECTIVE 2407
           gi|21593486|gb|AAM65453.1| imidazoleglycerol-phosphate
           synthase subunit H-like [Arabidopsis thaliana]
           gi|26449721|dbj|BAC41984.1| putative
           imidazoleglycerol-phosphate synthase subunit H
           [Arabidopsis thaliana] gi|28950813|gb|AAO63330.1|
           At5g60540 [Arabidopsis thaliana]
           gi|332009958|gb|AED97341.1| Pyridoxal biosynthesis
           protein PDX2 [Arabidopsis thaliana]
          Length = 255

 Score =  343 bits (880), Expect = 4e-92
 Identities = 180/252 (71%), Positives = 199/252 (78%), Gaps = 11/252 (4%)
 Frame = +3

Query: 249 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 428
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNL 60

Query: 429 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 608
           FPALREFVKMGKPVWGTCAGLIFLAD+AVGQKEGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA 120

Query: 609 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPPRKPAV-QLVXXXXXXX 785
           D+LVP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VP  K              
Sbjct: 121 DILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQIQEED 180

Query: 786 XXXXXXVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------ITEGDV 944
                 VIVAVKQGNLLATAFHPELTADTRWHSYF+KM  + EQ  S       ++ G+ 
Sbjct: 181 ALPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGET 240

Query: 945 R---EPPRIDLP 971
               EP + DLP
Sbjct: 241 SAGPEPAKPDLP 252


>ref|XP_002866384.1| ATPDX2/EMB2407/PDX2 [Arabidopsis lyrata subsp. lyrata]
           gi|297312219|gb|EFH42643.1| ATPDX2/EMB2407/PDX2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score =  341 bits (874), Expect = 2e-91
 Identities = 179/252 (71%), Positives = 198/252 (78%), Gaps = 11/252 (4%)
 Frame = +3

Query: 249 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 428
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNL 60

Query: 429 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 608
           FPALREFVKMGKPVWGTCAGLIFLAD+AVGQKEGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA 120

Query: 609 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPPRKPAV-QLVXXXXXXX 785
           D+ VP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VP  K              
Sbjct: 121 DISVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQIQEED 180

Query: 786 XXXXXXVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------ITEGDV 944
                 VIVAVKQGNLLATAFHPELTADTRWHSYF+KM  + EQ  S       ++ G+ 
Sbjct: 181 ALPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSNSSNTVVSVGET 240

Query: 945 R---EPPRIDLP 971
               EP + DLP
Sbjct: 241 SAGPEPAKPDLP 252


>gb|ADZ47881.1| pyridoxial biosynthesis 2 [Arabidopsis thaliana]
          Length = 255

 Score =  335 bits (860), Expect = 9e-90
 Identities = 177/252 (70%), Positives = 197/252 (78%), Gaps = 11/252 (4%)
 Frame = +3

Query: 249 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 428
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++ IIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSPIIPGGESTTMAKLAEYHNL 60

Query: 429 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 608
           FPALREFVKMGKPVWGTCAGLIFLA +AVGQKEGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLAGRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA 120

Query: 609 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPPRKPAV-QLVXXXXXXX 785
           D+LVP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VP  K              
Sbjct: 121 DILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQIQEED 180

Query: 786 XXXXXXVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------ITEGDV 944
                 VIVAVKQGNLLATAF+PELTADTRWHSYF+KM  + EQ  S       ++ G+ 
Sbjct: 181 ALPETKVIVAVKQGNLLATAFYPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGET 240

Query: 945 R---EPPRIDLP 971
               EP + DLP
Sbjct: 241 SAGPEPAKPDLP 252


>ref|XP_002285095.1| PREDICTED: pyridoxal biosynthesis protein PDX2-like [Vitis
           vinifera]
          Length = 252

 Score =  335 bits (859), Expect = 1e-89
 Identities = 175/228 (76%), Positives = 186/228 (81%), Gaps = 2/228 (0%)
 Frame = +3

Query: 249 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 428
           MAVGVLALQGSFNEHIAALR+LGVKG EIRK EQLE + +LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MAVGVLALQGSFNEHIAALRKLGVKGVEIRKPEQLEQVGSLIIPGGESTTMAKLAEYHNL 60

Query: 429 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 608
           FPALREFVK+GKPVWGTCAGLIFLA+KAVGQK GGQELVGGLDC VHRNFFGSQIQSFE 
Sbjct: 61  FPALREFVKLGKPVWGTCAGLIFLANKAVGQKTGGQELVGGLDCTVHRNFFGSQIQSFET 120

Query: 609 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPPRKPAVQL-VXXXXXXX 785
            L VPEL A EGGP +FRGVFIRAPAILE G  VEVLADY VP  K    +         
Sbjct: 121 QLSVPELAAKEGGPETFRGVFIRAPAILEVGPKVEVLADYPVPSGKLFDSISALEAPQEN 180

Query: 786 XXXXXXVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNK-GEQTLS 926
                 VIVAVKQGNLL TAFHPELTADTRWHSYF+KM ++ GE+  S
Sbjct: 181 AGSEKKVIVAVKQGNLLGTAFHPELTADTRWHSYFLKMTSEVGEEASS 228


>dbj|BAB08237.1| amidotransferase hisH-like protein [Arabidopsis thaliana]
          Length = 240

 Score =  332 bits (851), Expect = 1e-88
 Identities = 177/251 (70%), Positives = 196/251 (78%), Gaps = 10/251 (3%)
 Frame = +3

Query: 249 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 428
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNL 60

Query: 429 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 608
           FPALREFVKMGKPVWGTCAGLIFLAD+AV   EGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLADRAV---EGGQELVGGLDCTVHRNFFGSQIQSFEA 117

Query: 609 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPPRKPAVQLVXXXXXXXX 788
           D+LVP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VP  K              
Sbjct: 118 DILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNK-----------EDA 166

Query: 789 XXXXXVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------ITEGDVR 947
                VIVAVKQGNLLATAFHPELTADTRWHSYF+KM  + EQ  S       ++ G+  
Sbjct: 167 LPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGETS 226

Query: 948 ---EPPRIDLP 971
              EP + DLP
Sbjct: 227 AGPEPAKPDLP 237


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