BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013166
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...   611   e-172
emb|CBI16387.3| unnamed protein product [Vitis vinifera]              599   e-169
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...   591   e-166
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP...   553   e-155
ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi...   550   e-154

>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 447

 Score =  611 bits (1576), Expect = e-172
 Identities = 305/429 (71%), Positives = 345/429 (80%), Gaps = 1/429 (0%)
 Frame = +1

Query: 1    QQQQWTMSGGGAATWSVPPTSNYNHHNYQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHT 180
            QQQQW M    A+  +V   ++   +  QPT++EE+RTLWIGDLQYWV+ENYL++CFAHT
Sbjct: 7    QQQQW-MHPSHASAATVSSMASAQPYT-QPTSVEEVRTLWIGDLQYWVDENYLHSCFAHT 64

Query: 181  GEVMSIKIIRNKITQQPEGYGFVEFASHGAAERVLQTYNGTLMPGTDQPFRLNWASFGIG 360
            GEV+SIKIIRNKIT QPEGYGFVEF SH AAER+LQ YNGT MPGT+Q FRLNWASFGIG
Sbjct: 65   GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIG 124

Query: 361  ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFA 540
            ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGR+KGYGFVKF+
Sbjct: 125  ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFS 184

Query: 541  DEMERNRAMSEMNGVYCSSRPMRISAATPKKATGFQQPY-TAPKAVYPTPAFSTAAVQPF 717
            DEMERNRAM+EMNGVYCS+RPMRISAATPKK TGFQQ Y  A KA+YP PA++T  +Q  
Sbjct: 185  DEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQAL 244

Query: 718  PAVDNDITNTTIFVGGLDPNVTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEA 897
            PA DNDI NTTIFVG LDPNVTEEEL+QIF+QFG+LVY K   G+GCGFVQFGTR SAE 
Sbjct: 245  PA-DNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEE 303

Query: 898  AIQRLNGTMIGQQTVRLSWGRSMTTKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXX 1077
            AIQR+ GT+IGQ  VR+SWGRS T KQD PG+W Q ADP+QWS                 
Sbjct: 304  AIQRMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGA 363

Query: 1078 XPDPSLXXXXXXXXXXXXXXXXEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAY 1257
              DPSL                EG+Q++ AMAGAVP+VEQ++ELYDPLATPDVDKLN+AY
Sbjct: 364  TQDPSLYAYGAYAGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAY 423

Query: 1258 LAVHGSAMV 1284
            LAVHGSA++
Sbjct: 424  LAVHGSAIL 432


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  599 bits (1544), Expect = e-169
 Identities = 302/429 (70%), Positives = 341/429 (79%), Gaps = 1/429 (0%)
 Frame = +1

Query: 1    QQQQWTMSGGGAATWSVPPTSNYNHHNYQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHT 180
            QQQQW M    A+  +V   ++   +  QPT++EE+RTLWIGDLQYWV+ENYL++CFAHT
Sbjct: 7    QQQQW-MHPSHASAATVSSMASAQPYT-QPTSVEEVRTLWIGDLQYWVDENYLHSCFAHT 64

Query: 181  GEVMSIKIIRNKITQQPEGYGFVEFASHGAAERVLQTYNGTLMPGTDQPFRLNWASFGIG 360
            GEV+SIKIIRNKIT QPEGYGFVEF SH AAER+LQ YNGT MPGT+Q FRLNWASFGIG
Sbjct: 65   GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIG 124

Query: 361  ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFA 540
            ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGR+KGYGFVKF+
Sbjct: 125  ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFS 184

Query: 541  DEMERNRAMSEMNGVYCSSRPMRISAATPKKATGFQQPY-TAPKAVYPTPAFSTAAVQPF 717
            DEMERNRAM+EMNGVYCS+RPMRISAATPKK TGFQQ Y  A KA+YP PA++T  +Q  
Sbjct: 185  DEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQAL 244

Query: 718  PAVDNDITNTTIFVGGLDPNVTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEA 897
            PA DNDI NTTIFVG LDPNVTEEEL+QIF+QFG+LVY K   G+GCGFVQFGTR SAE 
Sbjct: 245  PA-DNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEE 303

Query: 898  AIQRLNGTMIGQQTVRLSWGRSMTTKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXX 1077
            AIQR+ GT+IGQ  VR+SWGRS T KQD PG+W Q ADP+QWS                 
Sbjct: 304  AIQRMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGA 363

Query: 1078 XPDPSLXXXXXXXXXXXXXXXXEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAY 1257
              DPSL                +    + AMAGAVP+VEQ++ELYDPLATPDVDKLN+AY
Sbjct: 364  TQDPSL--YAYGAYAGYLQYPQQARYYLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAY 421

Query: 1258 LAVHGSAMV 1284
            LAVHGSA++
Sbjct: 422  LAVHGSAIL 430


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 438

 Score =  591 bits (1523), Expect = e-166
 Identities = 300/429 (69%), Positives = 339/429 (79%), Gaps = 1/429 (0%)
 Frame = +1

Query: 1    QQQQWTMSGGGAATWSVPPTSNYNHHNYQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHT 180
            QQQQW M    A+  +V   ++   +  QPT++EE+RTLWIGDLQYWV+ENYL++CFAHT
Sbjct: 7    QQQQW-MHPSHASAATVSSMASAQPYT-QPTSVEEVRTLWIGDLQYWVDENYLHSCFAHT 64

Query: 181  GEVMSIKIIRNKITQQPEGYGFVEFASHGAAERVLQTYNGTLMPGTDQPFRLNWASFGIG 360
            GEV+SIKIIRNKIT QPEGYGFVEF SH AAER+LQ YNGT MPGT+Q FRLNWASFGIG
Sbjct: 65   GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIG 124

Query: 361  ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFA 540
            ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGR+KGYGFVKF+
Sbjct: 125  ERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFS 184

Query: 541  DEMERNRAMSEMNGVYCSSRPMRISAATPKKATGFQQPY-TAPKAVYPTPAFSTAAVQPF 717
            DEMERNRAM+EMNGVYCS+RPMRISAATPKK TGFQQ Y  A KA+YP PA++T  +Q  
Sbjct: 185  DEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQAL 244

Query: 718  PAVDNDITNTTIFVGGLDPNVTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEA 897
            PA DNDI NTTIFVG LDPNVTEEEL+QIF+QFG+LVY K   G+GCGFVQFGTR SAE 
Sbjct: 245  PA-DNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEE 303

Query: 898  AIQRLNGTMIGQQTVRLSWGRSMTTKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXX 1077
            AIQR+ GT+IGQ  VR+SWGRS T KQ         ADP+QWS                 
Sbjct: 304  AIQRMQGTVIGQLVVRISWGRSPTAKQ---------ADPSQWSSAYYGYGQGYDAYPYGA 354

Query: 1078 XPDPSLXXXXXXXXXXXXXXXXEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAY 1257
              DPSL                EG+Q++ AMAGAVP+VEQ++ELYDPLATPDVDKLN+AY
Sbjct: 355  TQDPSLYAYGAYAGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAY 414

Query: 1258 LAVHGSAMV 1284
            LAVHGSA++
Sbjct: 415  LAVHGSAIL 423


>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
            sativus]
          Length = 422

 Score =  553 bits (1424), Expect = e-155
 Identities = 283/416 (68%), Positives = 314/416 (75%)
 Frame = +1

Query: 37   ATWSVPPTSNYNHHNYQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNK 216
            AT +  PT    HH  QPTT+EE+RTLWIGDLQYWV+E+YLN+CFAHTGEV+SIKIIRNK
Sbjct: 2    ATLAGQPT----HH--QPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNK 55

Query: 217  ITQQPEGYGFVEFASHGAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSI 396
            IT QPEGYGFVEF SH AAER+LQTYNGT MPGT+Q FRLNWASFGIGERRPDAGPEHSI
Sbjct: 56   ITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSI 115

Query: 397  FVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEM 576
            FVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADE ERNRAMSEM
Sbjct: 116  FVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEM 175

Query: 577  NGVYCSSRPMRISAATPKKATGFQQPYTAPKAVYPTPAFSTAAVQPFPAVDNDITNTTIF 756
            NGVYCS+RPMRISAATPKK  G QQ Y+  KA+YP PA++T+   P    D D  NTTIF
Sbjct: 176  NGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSV--PVLPADYDANNTTIF 233

Query: 757  VGGLDPNVTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQ 936
            VG LDPN+TEEEL+Q F QFG++ Y K   GKGCGFVQFGTR SAE AIQ++ G +IGQQ
Sbjct: 234  VGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQ 293

Query: 937  TVRLSWGRSMTTKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPSLXXXXXXX 1116
             VR SWGR+   KQD    W Q  DPNQWS                   DPSL       
Sbjct: 294  VVRTSWGRNPAAKQDLT-TWGQQVDPNQWS-AYYGYGGTYDAYGYGVVQDPSLYGYGAYS 351

Query: 1117 XXXXXXXXXEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMV 1284
                     +G+Q++  +AGAVPSVEQ EE  D L TPDVD LN AYL+ H SA++
Sbjct: 352  GYASYPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDCLNDAYLSKHESAIL 407


>ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi|355486476|gb|AES67679.1|
            RNA-binding protein [Medicago truncatula]
          Length = 428

 Score =  550 bits (1417), Expect = e-154
 Identities = 272/409 (66%), Positives = 314/409 (76%), Gaps = 8/409 (1%)
 Frame = +1

Query: 82   YQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNKITQQPEGYGFVEFAS 261
            +QP +LEE+RTLWIGDLQYWV+ENYL  CF+HTGEV+SIKIIRNKIT QPEGYGF+EF S
Sbjct: 6    HQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVS 65

Query: 262  HGAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQ 441
            H AAERVLQTYNGT MPGT+Q FRLNWASFGIGERRPDAGP+HSIFVGDLAPDVTDYLLQ
Sbjct: 66   HSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQ 125

Query: 442  ETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEMNGVYCSSRPMRISAA 621
            ETFR  Y SVRGAKVVTDPNTGRSKGYGFVKF+DE ERNRAMSEMNGVYCS+RPMRISAA
Sbjct: 126  ETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAA 185

Query: 622  TPKKATGFQQ-PYTA-------PKAVYPTPAFSTAAVQPFPAVDNDITNTTIFVGGLDPN 777
            TPKK TG+QQ PY A       PKA+YP PA++TA V   P  + D+ NTTI+VG LD N
Sbjct: 186  TPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPP-EYDVNNTTIYVGNLDLN 244

Query: 778  VTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQTVRLSWG 957
            V+EEEL+Q F QFG++V  K  PGK CGFVQFG R SAE AIQ++ G ++GQQ +R+SWG
Sbjct: 245  VSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWG 304

Query: 958  RSMTTKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPSLXXXXXXXXXXXXXX 1137
            R  T +QD PG W Q  D +QWS                   DPS+              
Sbjct: 305  RPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPSMYAYAGYASYAQYPQ 364

Query: 1138 XXEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMV 1284
              EG Q++ AM  +VP++EQ+EELYDPLA PDVDKLN+AYL+VHG+A++
Sbjct: 365  QVEGAQDVSAM--SVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAIL 411