BLASTX nr result

ID: Coptis21_contig00013155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013155
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321011.1| multidrug resistance protein ABC transporter...    84   3e-21
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...    83   3e-21
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...    85   5e-21
ref|XP_002878472.1| ATMRP10 [Arabidopsis lyrata subsp. lyrata] g...    82   1e-20
ref|NP_191829.1| ABC transporter C family member 14 [Arabidopsis...    82   1e-20

>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score = 83.6 bits (205), Expect(2) = 3e-21
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = +3

Query: 348 KNATNPFRLDEIPSLAPDHGAEVISQLFESKWPKPSENSMHPVRTTLLRCFWKD 509
           K   +P ++D++P+L+P+H AE +SQLFES WPKP E S HPVRTTLLRCFWK+
Sbjct: 273 KGYKSPLKIDDVPTLSPEHRAEKMSQLFESSWPKPHEKSNHPVRTTLLRCFWKE 326



 Score = 43.1 bits (100), Expect(2) = 3e-21
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +2

Query: 278 NIAGYVSATLISRVVWLWLNPLLEKCYKS 364
           N+ G+ +A++IS+  WLW+NPLL K YKS
Sbjct: 249 NVTGFATASIISKSFWLWMNPLLRKGYKS 277


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score = 83.2 bits (204), Expect(2) = 3e-21
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = +3

Query: 348 KNATNPFRLDEIPSLAPDHGAEVISQLFESKWPKPSENSMHPVRTTLLRCFWKD 509
           K   +P ++DE+P+L+P+H AE +SQLF +KWPKP E S HPVRTTLLRCFWK+
Sbjct: 272 KGYKSPLKIDEVPTLSPEHRAERMSQLFAAKWPKPHEKSKHPVRTTLLRCFWKE 325



 Score = 43.5 bits (101), Expect(2) = 3e-21
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +2

Query: 278 NIAGYVSATLISRVVWLWLNPLLEKCYKS 364
           N++G+ SA+ +S+  WLW+NPLL K YKS
Sbjct: 248 NVSGFASASRVSKAFWLWMNPLLSKGYKS 276


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score = 85.1 bits (209), Expect(2) = 5e-21
 Identities = 35/56 (62%), Positives = 46/56 (82%)
 Frame = +3

Query: 348 KNATNPFRLDEIPSLAPDHGAEVISQLFESKWPKPSENSMHPVRTTLLRCFWKDFV 515
           K   +P  L+E+P+L+P+H AE +++LFES WPKPSENS HPVRTTLLRCFWK+ +
Sbjct: 278 KGYKSPLTLEEVPTLSPEHKAERLARLFESSWPKPSENSSHPVRTTLLRCFWKEIL 333



 Score = 40.8 bits (94), Expect(2) = 5e-21
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +2

Query: 278 NIAGYVSATLISRVVWLWLNPLLEKCYKS 364
           N++ Y SA+  S++ WLW+NPLL K YKS
Sbjct: 254 NVSLYASASAFSKMFWLWMNPLLSKGYKS 282


>ref|XP_002878472.1| ATMRP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297324310|gb|EFH54731.1| ATMRP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1546

 Score = 82.0 bits (201), Expect(2) = 1e-20
 Identities = 33/54 (61%), Positives = 44/54 (81%)
 Frame = +3

Query: 348 KNATNPFRLDEIPSLAPDHGAEVISQLFESKWPKPSENSMHPVRTTLLRCFWKD 509
           K   +P  LD++P+L+P+H AE ++ LFESKWPKP ENS +PVRTTL+RCFWK+
Sbjct: 274 KGYKSPLNLDQVPTLSPEHRAEKLATLFESKWPKPQENSRNPVRTTLIRCFWKE 327



 Score = 42.4 bits (98), Expect(2) = 1e-20
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +2

Query: 278 NIAGYVSATLISRVVWLWLNPLLEKCYKS 364
           N++ Y SA+ IS+  WLW+NPLL K YKS
Sbjct: 250 NVSLYASASFISKTFWLWMNPLLSKGYKS 278


>ref|NP_191829.1| ABC transporter C family member 14 [Arabidopsis thaliana]
           gi|75335712|sp|Q9LZJ5.1|AB14C_ARATH RecName: Full=ABC
           transporter C family member 14; Short=ABC transporter
           ABCC.14; Short=AtABCC14; AltName: Full=ATP-energized
           glutathione S-conjugate pump 10; AltName:
           Full=Glutathione S-conjugate-transporting ATPase 10;
           AltName: Full=Multidrug resistance-associated protein 10
           gi|7362750|emb|CAB83120.1| ABC transporter-like protein
           [Arabidopsis thaliana] gi|332646860|gb|AEE80381.1| ABC
           transporter C family member 14 [Arabidopsis thaliana]
          Length = 1539

 Score = 82.0 bits (201), Expect(2) = 1e-20
 Identities = 33/54 (61%), Positives = 44/54 (81%)
 Frame = +3

Query: 348 KNATNPFRLDEIPSLAPDHGAEVISQLFESKWPKPSENSMHPVRTTLLRCFWKD 509
           K   +P  LD++P+L+P+H AE ++ LFESKWPKP ENS +PVRTTL+RCFWK+
Sbjct: 270 KGYKSPLNLDQVPTLSPEHRAEKLATLFESKWPKPQENSRNPVRTTLIRCFWKE 323



 Score = 42.4 bits (98), Expect(2) = 1e-20
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +2

Query: 278 NIAGYVSATLISRVVWLWLNPLLEKCYKS 364
           N++ Y SA+ IS+  WLW+NPLL K YKS
Sbjct: 246 NVSLYASASFISKTFWLWMNPLLRKGYKS 274


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