BLASTX nr result

ID: Coptis21_contig00013154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013154
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...   123   1e-26
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   115   4e-24
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...   115   4e-24
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...   114   6e-24
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]   114   8e-24

>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223542676|gb|EEF44213.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/134 (50%), Positives = 87/134 (64%)
 Frame = -2

Query: 403  LPSEVNKLLHLRYLDLSNTRLKELPETMRSLVNLQTXXXXXXXXXXXLPEGIGELSNLRH 224
            LPSE+ KLLHLR+L+LS   L+ELP T+ +L NLQT           LP G+G+L NLRH
Sbjct: 606  LPSEIGKLLHLRWLNLSKLDLEELPNTLSNLYNLQTLNLDRCKRLQRLPGGLGKLKNLRH 665

Query: 223  LEVEGTSNLKYYPRGIERLSQLRTLSKFVVSDGSKGSVIGELGNLNFLKGRLSITGLRHV 44
            L +  T  L  +P+GIERLS LR L+KFVVS+  +G  I EL NL +L+G L I+ L  V
Sbjct: 666  LNLRETDCLNIFPQGIERLSNLRMLTKFVVSENKEGCNIAELKNLKYLRGHLEISRLEKV 725

Query: 43   KSVNEAKLAELQKK 2
               ++AK A+L  K
Sbjct: 726  VDTDKAKEADLTNK 739


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 919

 Score =  115 bits (288), Expect = 4e-24
 Identities = 72/138 (52%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
 Frame = -2

Query: 409  EVLPSEVNKLLHLRYLDLSNTR-LKELPETMRSLVNLQTXXXXXXXXXXXLPEGIGELSN 233
            E LP EV KL+HLRYLDLS  + L+ELPET+  L NLQT           LP+ +G+L N
Sbjct: 590  EELPKEVGKLIHLRYLDLSRCQSLRELPETICDLYNLQTLNIQYCISLQKLPQAMGKLIN 649

Query: 232  LRHLEVEGTSNLKYYPRGIERLSQLRTLSKFVVSD-GSKGSVIGELGNLNFLKGRLSITG 56
            LRHLE   T +LK  P+GI RLS L+TL  F+VS  G+    IG+L NLN L+G LSI G
Sbjct: 650  LRHLE-NYTRSLKGLPKGIGRLSSLQTLDVFIVSSHGNDECQIGDLRNLNNLRGGLSIQG 708

Query: 55   LRHVKSVNEAKLAELQKK 2
            L  VK   EA+ AEL+ +
Sbjct: 709  LDEVKDAGEAEKAELKNR 726


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 987

 Score =  115 bits (288), Expect = 4e-24
 Identities = 70/140 (50%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
 Frame = -2

Query: 409  EVLPSEVNKLLHLRYLDLSNTR-LKELPETMRSLVNLQTXXXXXXXXXXXLPEGIGELSN 233
            E +PS+V KLLHLRYLD S  + LKELPET+  L NLQ+           LP+ + +L  
Sbjct: 619  EEIPSDVGKLLHLRYLDFSYCKWLKELPETISDLYNLQSLDLTWCVALKKLPQKMRKLIR 678

Query: 232  LRHLEVEGTSNLKYYPRGIERLSQLRTLSKFVVSDG---SKGSVIGELGNLNFLKGRLSI 62
            LRHLE+ G S + + PRGIE L+ LRTL+ F+VS G   S  + +GELGNL+ L+G L I
Sbjct: 679  LRHLEIFG-SGVAFLPRGIEELTSLRTLTNFIVSGGGGQSGAANLGELGNLSHLRGTLWI 737

Query: 61   TGLRHVKSVNEAKLAELQKK 2
              L +V+ VNEA  AE++KK
Sbjct: 738  EKLLNVRDVNEAVKAEIKKK 757


>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 906

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/134 (46%), Positives = 82/134 (61%)
 Frame = -2

Query: 403 LPSEVNKLLHLRYLDLSNTRLKELPETMRSLVNLQTXXXXXXXXXXXLPEGIGELSNLRH 224
           LPS V +L HLR+L+LS      LP+T+  L NL             LP G+G+L NLR+
Sbjct: 590 LPSAVGRLFHLRWLNLSGLNFVVLPDTICKLYNLLALKLHGCRRLHRLPRGLGKLINLRY 649

Query: 223 LEVEGTSNLKYYPRGIERLSQLRTLSKFVVSDGSKGSVIGELGNLNFLKGRLSITGLRHV 44
           L +E T +L   P+GI RLS LRTLSKF + +  +G  +GEL NLN L+G L I+GL  V
Sbjct: 650 LNIEETESLSVLPQGIGRLSNLRTLSKFCIGENREGCNVGELKNLNHLRGHLEISGLEKV 709

Query: 43  KSVNEAKLAELQKK 2
           ++VNE   A L+ K
Sbjct: 710 RNVNEVMEANLKNK 723


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score =  114 bits (285), Expect = 8e-24
 Identities = 71/138 (51%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
 Frame = -2

Query: 409  EVLPSEVNKLLHLRYLDLSNT-RLKELPETMRSLVNLQTXXXXXXXXXXXLPEGIGELSN 233
            E LP EV KL+HLRYL+LS   RL+ELPET+  L NLQT           LP+ +G+L N
Sbjct: 595  EELPKEVGKLIHLRYLNLSLCYRLRELPETICDLYNLQTLNIEGCSSLQKLPQAMGKLIN 654

Query: 232  LRHLEVEGTSNLKYYPRGIERLSQLRTLSKFVVSD-GSKGSVIGELGNLNFLKGRLSITG 56
            LRHLE   T +LK  P+GI RLS L+TL  F+VS  G+    IG+L NLN L+G LSI  
Sbjct: 655  LRHLENCNTGSLKGLPKGIGRLSSLQTLDVFIVSSHGNDECQIGDLRNLNNLRGGLSIQR 714

Query: 55   LRHVKSVNEAKLAELQKK 2
            L  VK   EA+ AEL+ +
Sbjct: 715  LDEVKDAGEAEKAELKNR 732


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