BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013142
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002511212.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002871294.1| mitochondrial transcription termination fact...    74   2e-11
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...    72   4e-11

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/103 (40%), Positives = 66/103 (64%)
 Frame = +1

Query: 1   PYCLMSSVEKIRKGVEFFTRKLRWNLGDICECPVILRLSLERRIVPRCNVLELLKSKDII 180
           P+C+M S +KI KG++FF  K+ W   +I  CPVIL LSLE+RI+PRC V+++L SK +I
Sbjct: 296 PHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWSKGLI 355

Query: 181 KFNMNVYSLSAVXXXXXXXXXXXXVNKYKETLPEVVKAYSGRI 309
           K ++   SL+ V            V K++E +P+++  Y G++
Sbjct: 356 KKDI---SLNTVLLPVEKRFLERFVTKFEEEVPQLLSVYEGKV 395


>ref|XP_002511212.1| conserved hypothetical protein [Ricinus communis]
           gi|223550327|gb|EEF51814.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 423

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/111 (37%), Positives = 66/111 (59%)
 Frame = +1

Query: 1   PYCLMSSVEKIRKGVEFFTRKLRWNLGDICECPVILRLSLERRIVPRCNVLELLKSKDII 180
           P C++SS +KIRK ++FF  KL  +   I + P ++ LSLE+RI+PRC+VL +L SK++I
Sbjct: 313 PMCMLSSEKKIRKLMDFFVNKLNISPSVISKNPNLMLLSLEKRILPRCSVLNILMSKELI 372

Query: 181 KFNMNVYSLSAVXXXXXXXXXXXXVNKYKETLPEVVKAYSGRI*FSEFQVD 333
                 + L  +            V KY++ +PE+V+A+ GR+ F  F  D
Sbjct: 373 N---EGFKLIYMLRMTEKMFGKNVVTKYQDLVPEIVEAHQGRVEFQGFSRD 420


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = +1

Query: 1   PYCLMSSVEKIRKGVEFFTRKLRWNLGDICECPVILRLSLERRIVPRCNVLELLKSKDII 180
           P+C+M S  KI + +EFF  ++      I ECPV+L  SLE+RI+PRC+V ++L S  ++
Sbjct: 303 PHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGLV 362

Query: 181 KFNMNVYSLSAVXXXXXXXXXXXXVNKYKETLPEVVKAYSG 303
           K +   +SL+++            V KY+E LPE++  Y G
Sbjct: 363 KED---WSLTSLLVPVEKVFLEKLVIKYEEELPELMDVYLG 400


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/102 (35%), Positives = 61/102 (59%)
 Frame = +1

Query: 1   PYCLMSSVEKIRKGVEFFTRKLRWNLGDICECPVILRLSLERRIVPRCNVLELLKSKDII 180
           P+C+M S +KI K ++FF  K+ +    I +CPV+L  SLE+RIVPRC V+ +L +K ++
Sbjct: 297 PHCMMLSEKKIMKAMDFFVNKMGFPSKVIAQCPVVLFFSLEKRIVPRCRVIRVLMNKRLV 356

Query: 181 KFNMNVYSLSAVXXXXXXXXXXXXVNKYKETLPEVVKAYSGR 306
           K ++   SL++V            V ++ E +P ++  Y G+
Sbjct: 357 KEDV---SLASVLLPVEQCFLDRFVTRFAEEIPRLLSVYEGK 395


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/103 (36%), Positives = 61/103 (59%)
 Frame = +1

Query: 1   PYCLMSSVEKIRKGVEFFTRKLRWNLGDICECPVILRLSLERRIVPRCNVLELLKSKDII 180
           P+C+M S +KI   ++FF  K+      I +CPV+L  SLE+RIVPRC V+ +L +K ++
Sbjct: 272 PHCMMLSEKKIMLAMDFFVNKMGLPSKVIAQCPVLLFFSLEKRIVPRCRVIRVLMNKGLV 331

Query: 181 KFNMNVYSLSAVXXXXXXXXXXXXVNKYKETLPEVVKAYSGRI 309
           K ++   SL+ V            V KY+E +P +++ Y G+I
Sbjct: 332 KKDV---SLATVLVPTEKCFLDRFVIKYEEEVPLLLRVYEGKI 371