BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013120
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33876.3| unnamed protein product [Vitis vinifera]              240   3e-61
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   240   3e-61
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   228   2e-57
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   228   2e-57
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   226   7e-57

>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  240 bits (613), Expect = 3e-61
 Identities = 126/212 (59%), Positives = 149/212 (70%), Gaps = 2/212 (0%)
 Frame = -1

Query: 775 NRKKKLCIFNIPYSYSVTDIKTLLAECGTVKDVEIIKQKDGRHKGFAFITMASADEAQTV 596
           N+K+KL + N+P+S SV DIK L  ECGTV DVEIIKQKDGR +G+AF+TM S +EAQ V
Sbjct: 56  NQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAV 115

Query: 595 IEKFDSYELSGRIIRVELAKRWXXXXXXXXXXXXXK--GETPHKLYVSNLAWKARATHLR 422
           +EKFDSYELSGRIIRVE AKR+                GET HKLYVSNLAWK R+THLR
Sbjct: 116 VEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLR 175

Query: 421 EFFSSEFNPVSARVVFDTPSGGSAGYGFVSFXXXXXXXXAISSMDGKELMGRPIRLKFSE 242
           EFFSS FNPVS RVVFD+PSG S GYGF SF        AIS++DGKELMGRP+ LKFS 
Sbjct: 176 EFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSV 235

Query: 241 RNVDGSSDLEAQITPDGQSKEAEDSKRNPEES 146
           + +D S D         + +E + S+  PEE+
Sbjct: 236 KTIDESGD---------EKEEGDISEGQPEEA 258


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  240 bits (613), Expect = 3e-61
 Identities = 126/212 (59%), Positives = 149/212 (70%), Gaps = 2/212 (0%)
 Frame = -1

Query: 775 NRKKKLCIFNIPYSYSVTDIKTLLAECGTVKDVEIIKQKDGRHKGFAFITMASADEAQTV 596
           N+K+KL + N+P+S SV DIK L  ECGTV DVEIIKQKDGR +G+AF+TM S +EAQ V
Sbjct: 86  NQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAV 145

Query: 595 IEKFDSYELSGRIIRVELAKRWXXXXXXXXXXXXXK--GETPHKLYVSNLAWKARATHLR 422
           +EKFDSYELSGRIIRVE AKR+                GET HKLYVSNLAWK R+THLR
Sbjct: 146 VEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLR 205

Query: 421 EFFSSEFNPVSARVVFDTPSGGSAGYGFVSFXXXXXXXXAISSMDGKELMGRPIRLKFSE 242
           EFFSS FNPVS RVVFD+PSG S GYGF SF        AIS++DGKELMGRP+ LKFS 
Sbjct: 206 EFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSV 265

Query: 241 RNVDGSSDLEAQITPDGQSKEAEDSKRNPEES 146
           + +D S D         + +E + S+  PEE+
Sbjct: 266 KTIDESGD---------EKEEGDISEGQPEEA 288


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  228 bits (581), Expect = 2e-57
 Identities = 124/210 (59%), Positives = 152/210 (72%)
 Frame = -1

Query: 775 NRKKKLCIFNIPYSYSVTDIKTLLAECGTVKDVEIIKQKDGRHKGFAFITMASADEAQTV 596
           N+K+KL IFN+P+S SV DIK L  +CGTV DVEIIKQK+GR +GFAF+TMAS DEAQ  
Sbjct: 91  NQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAA 150

Query: 595 IEKFDSYELSGRIIRVELAKRWXXXXXXXXXXXXXKGETPHKLYVSNLAWKARATHLREF 416
           I+KFDS E+SGR+I+VE AKR               GET +KLYVSNLAWK R+ +LR+F
Sbjct: 151 IQKFDSQEISGRVIKVEFAKR-LKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDF 209

Query: 415 FSSEFNPVSARVVFDTPSGGSAGYGFVSFXXXXXXXXAISSMDGKELMGRPIRLKFSERN 236
           FS  FNP++ARVVFD+P+G SAGYGFVSF        A+SS++GKELMGRP+RLKFSERN
Sbjct: 210 FSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERN 269

Query: 235 VDGSSDLEAQITPDGQSKEAEDSKRNPEES 146
           V+     EA+ TP     E++     PEES
Sbjct: 270 VN-----EAE-TPKEDIVESQ-----PEES 288


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  228 bits (581), Expect = 2e-57
 Identities = 124/210 (59%), Positives = 152/210 (72%)
 Frame = -1

Query: 775 NRKKKLCIFNIPYSYSVTDIKTLLAECGTVKDVEIIKQKDGRHKGFAFITMASADEAQTV 596
           N+K+KL IFN+P+S SV DIK L  +CGTV DVEIIKQK+GR +GFAF+TMAS DEAQ  
Sbjct: 85  NQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAA 144

Query: 595 IEKFDSYELSGRIIRVELAKRWXXXXXXXXXXXXXKGETPHKLYVSNLAWKARATHLREF 416
           I+KFDS E+SGR+I+VE AKR               GET +KLYVSNLAWK R+ +LR+F
Sbjct: 145 IQKFDSQEISGRVIKVEFAKR-LKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDF 203

Query: 415 FSSEFNPVSARVVFDTPSGGSAGYGFVSFXXXXXXXXAISSMDGKELMGRPIRLKFSERN 236
           FS  FNP++ARVVFD+P+G SAGYGFVSF        A+SS++GKELMGRP+RLKFSERN
Sbjct: 204 FSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERN 263

Query: 235 VDGSSDLEAQITPDGQSKEAEDSKRNPEES 146
           V+     EA+ TP     E++     PEES
Sbjct: 264 VN-----EAE-TPKEDIVESQ-----PEES 282


>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 282

 Score =  226 bits (576), Expect = 7e-57
 Identities = 122/210 (58%), Positives = 144/210 (68%), Gaps = 3/210 (1%)
 Frame = -1

Query: 766 KKLCIFNIPYSYSVTDIKTLLAECGTVKDVEIIKQKDGRHKGFAFITMASADEAQTVIEK 587
           KKL + N+ +S +  DI  L A+CGTV DVEIIK KDGR KG+AF+TMAS +EAQ  ++K
Sbjct: 73  KKLYVVNLSWSLTAADITDLFAQCGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDK 132

Query: 586 FDSYELSGRIIRVELAKRWXXXXXXXXXXXXXKGETPHKLYVSNLAWKARATHLREFFSS 407
           FDSYELSGRIIRVELAKR               GET H +Y SNLAWKAR+THLR+ F+ 
Sbjct: 133 FDSYELSGRIIRVELAKRLKKPPSLPPPPGPRPGETRHVIYASNLAWKARSTHLRQVFTE 192

Query: 406 EF-NPVSARVVFDTPSGGSAGYGFVSFXXXXXXXXAISSMDGKELMGRPIRLKFSERNVD 230
            F  P SARVVFD+PSG SAGYGFVSF        AIS++DGKELMGRP+RLKFSE+N +
Sbjct: 193 NFKTPSSARVVFDSPSGRSAGYGFVSFLTREDAEAAISTVDGKELMGRPLRLKFSEKNKE 252

Query: 229 GSSDLEAQITPDGQSKEAED--SKRNPEES 146
             S  +     D  S+E ED  S   PEES
Sbjct: 253 AGSQNDEDQIKDAGSEEDEDQGSDAQPEES 282