BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013115
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...   112   2e-23
ref|XP_002324026.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    70   1e-16
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477313|gb|AES58516.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 346

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/54 (96%), Positives = 52/54 (96%)
 Frame = -1

Query: 288 HGTSRPCLRGTVERATHECCRVGRANNSNAFGLFFEQESQRYLTFTMIRTPSSY 127
           H  SRPCLRGTVERATHECCRVGRANNSNAFGLFFEQESQRYLTFTMIRTPSSY
Sbjct: 247 HACSRPCLRGTVERATHECCRVGRANNSNAFGLFFEQESQRYLTFTMIRTPSSY 300


>ref|XP_002324026.1| predicted protein [Populus trichocarpa] gi|222867028|gb|EEF04159.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/81 (64%), Positives = 53/81 (65%)
 Frame = -2

Query: 287 MALLDPVSEGQLNERLMNAAGSDEPITRTRSVCFLSKNHSVTLPSP**GLQVLMAEHEEI 108
           M LLD VSEGQLNER MNA GSDEPITRT                      +LMAEHEEI
Sbjct: 1   MVLLDHVSEGQLNERFMNAVGSDEPITRT----------------------LLMAEHEEI 38

Query: 107 YHQYDDGNGN*KHDWGLRGPR 45
           YHQYDDGNGN KHD GLRGPR
Sbjct: 39  YHQYDDGNGNQKHDRGLRGPR 59


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 70.1 bits (170), Expect(2) = 1e-16
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 189 TDRTRSSYWLVRPGSIHESLVQLSLGDRVEKCHAW 293
           +DRTRSSYWLVRPGSIHESLVQLSLGD VEK HAW
Sbjct: 243 SDRTRSSYWLVRPGSIHESLVQLSLGDTVEKYHAW 277



 Score = 41.2 bits (95), Expect(2) = 1e-16
 Identities = 20/25 (80%), Positives = 20/25 (80%)
 Frame = +2

Query: 2   KKSHAYVTVTDVSIISDHEDPSRAS 76
           KKSHAYVTVTD  II DHED  RAS
Sbjct: 219 KKSHAYVTVTDGFIILDHEDAGRAS 243


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/42 (85%), Positives = 36/42 (85%)
 Frame = +2

Query: 2   KKSHAYVTVTDVSIISDHEDPSRASSFHSHHHIDDKSPRALP 127
           KKSHAYVTVTD  II DHEDP RAS FHS HHIDDKSPRALP
Sbjct: 221 KKSHAYVTVTDGLIILDHEDPGRASGFHS-HHIDDKSPRALP 261


>ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|222869001|gb|EEF06132.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/42 (80%), Positives = 34/42 (80%)
 Frame = +2

Query: 2   KKSHAYVTVTDVSIISDHEDPSRASSFHSHHHIDDKSPRALP 127
           KKSHAYVTV D  II DHEDP RAS FHSHHHID KSPRA P
Sbjct: 62  KKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103